RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 FBXO46Q6PJ61 603 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 RHBDF2Q6PJF5 856 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF783Q6ZMS7 281 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 C17orf107Q6ZR85 190 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ZBTB49Q6ZSB9 765 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PAGE2Q7Z2X7 111 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 SERINC5Q86VE9 423 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PHF13Q86YI8 300 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 DEFB107AQ8IZN7 70 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ARRDC1Q8N5I2 433 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PLA2G15Q8NCC3 412 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 OR5M1Q8NGP8 315 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ECHDC3Q96DC8 303 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 L3HYPDHQ96EM0 354 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 RRNAD1Q96FB5 475 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC45A3Q96JT2 553 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 C5orf34Q96MH7 638 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 Q96MT0 163 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 WFIKKN1Q96NZ8 548 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 LGMNQ99538 433 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 POTEKPQ9BYX7 375 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 REG4Q9BYZ8 158 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF436Q9C0F3 470 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 SLIRPQ9GZT3 109 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 LHPPQ9H008 270 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF768Q9H5H4 540 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 RNF146Q9NTX7 359 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 TDP1Q9NUW8 608 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 RAB20Q9NX57 234 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 DUS2Q9NX74 493 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 AKAP7Q9P0M2 348 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 METTL1Q9UBP6 276 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 CLEC2DQ9UHP7 191 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 MAGEL2Q9UJ55 1249 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ADAMTS5Q9UNA0 930 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 WASF3Q9UPY6 502 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 AURKCQ9UQB9 309 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC9A8Q9Y2E8 581 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 STARD10Q9Y365 291 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 MAP2P11137 1827 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 CD163L1Q9NR16 1453 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 EXOC1LA0A1B0GW35 172 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 A0A1W2PPC4 97 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 METTL21EPA6NDL7 271 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 C5orf52A6NGY3 159 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 SDR42E2A6NKP2 422 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PRR23D1E9PI22 279 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 TSTD3H0UI37 97 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 H0YAE9 185 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 WWP2O00308 870 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 DLEU1O43261 78 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 LIASO43766 372 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 FMO6PO60774 539 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 CYP7B1O75881 506 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 NXPH2O95156 264 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 GADD45GO95257 159 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 C22orf31O95567 290 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 MOCS2O96007 188 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 C2P06681 752 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 THP07101 528 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 FGF2P09038 288 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PRR23D2P0DMB1 279 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 AKR1A1P14550 325 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 OR1E1P30953 314 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 THBS4P35443 961 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PRELPP51888 382 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 LIMK2P53671 638 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 SUMO3P55854 103 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 RAC3P60763 192 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PSME3P61289 254 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PKIAP61925 76 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 E2F1Q01094 437 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 TNFRSF9Q07011 255 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 TROAPQ12815 778 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF155Q12901 538 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 TSPAN31Q12999 210 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 TRAF3Q13114 568 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 GPR17Q13304 367 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 NAE1Q13564 534 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PTGR1Q14914 329 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 DRAP1Q14919 205 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 P2RY14Q15391 338 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 GUCA2BQ16661 112 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 LRRC26Q2I0M4 334 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 MCMDC2Q4G0Z9 681 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PTPN20Q4JDL3 420 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 C1orf141Q5JVX7 400 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 MEDAGQ5VYS4 303 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 NXNL2Q5VZ03 156 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 BSPRYQ5W0U4 402 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 XAF1Q6GPH4 301 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 FRMPD2BQ6IN97 320 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 SPNS3Q6ZMD2 512 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 SH2D5Q6ZV89 423 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC24A5Q71RS6 500 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 EIF3MQ7L2H7 374 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 IRF2BP1Q8IU81 584 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PLD3Q8IV08 490 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 CEP97Q8IW35 865 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms