RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 TP73O15350 636 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 FGF17O60258 216 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 GOSR1O95249 250 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 EPPINO95925 133 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 RFPL3SP0C7P2 107 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 CPN2P22792 545 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 SERPINB3P29508 390 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 TIMP3P35625 211 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 MSH2P43246 934 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 ARFIP1P53367 373 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 KCNJ2P63252 427 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 IRF8Q02556 426 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 FOXD4Q12950 439 aaPredicted RBP16.4■□□□□ 0.22
PCGF3-209ENST00000475288 CHIT1Q13231 466 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 SPRED3Q2MJR0 410 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 TBCELQ5QJ74 424 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 CHSY3Q70JA7 882 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 LRRC70Q7Z2Q7 622 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 MAATS1Q7Z4T9 603 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 CDC20BQ86Y33 519 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 SLC35F6Q8N357 371 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 SNX31Q8N9S9 440 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 FBXO36Q8NEA4 188 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 GOT1L1Q8NHS2 421 aaPredicted RBP16.4■□□□□ 0.22
PCGF3-209ENST00000475288 PELOQ9BRX2 385 aaKnown RBP16.4■□□□□ 0.22
PCGF3-209ENST00000475288 PHACTR1Q9C0D0 580 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 ALKBH4Q9NXW9 302 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 MTRF1LQ9UGC7 380 aaKnown RBP16.4■□□□□ 0.22
PCGF3-209ENST00000475288 ADGRE2Q9UHX3 823 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 RPH3AQ9Y2J0 694 aaPredicted RBP16.4■□□□□ 0.22
PCGF3-209ENST00000475288 AKAP6Q13023 2319 aa16.4■□□□□ 0.22
PCGF3-209ENST00000475288 NCKAP5O14513 1909 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 OR6C76A6NM76 312 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 SEC31AO94979 1220 aaKnown RBP16.39■□□□□ 0.21
PCGF3-209ENST00000475288 CCDC166P0CW27 439 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 CD1DP15813 335 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 UQCRC1P31930 480 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 SSR2P43308 183 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 ID2Q02363 134 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 SF3B4Q15427 424 aaKnown RBP eCLIP16.39■□□□□ 0.212e-8■■■■■ 90.7
PCGF3-209ENST00000475288 NTRK2Q16620 822 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 POMZP3Q6PJE2 187 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 PAMR1Q6UXH9 720 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 LACC1Q8IV20 430 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 ANKMY2Q8IV38 441 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 ST13P4Q8IZP2 240 aaPredicted RBP16.39■□□□□ 0.21
PCGF3-209ENST00000475288 ZCCHC7Q8N3Z6 543 aaKnown RBP16.39■□□□□ 0.21
PCGF3-209ENST00000475288 LIX1Q8N485 282 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 SREK1Q8WXA9 508 aaKnown RBP16.39■□□□□ 0.21
PCGF3-209ENST00000475288 CMTM7Q96FZ5 175 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 CD244Q9BZW8 370 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 SLC6A15Q9H2J7 730 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 RPF2Q9H7B2 306 aaKnown RBP16.39■□□□□ 0.21
PCGF3-209ENST00000475288 PHF11Q9UIL8 331 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 CNOT11Q9UKZ1 510 aaKnown RBP16.39■□□□□ 0.21
PCGF3-209ENST00000475288 CBLCQ9ULV8 474 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 PLEKHA6Q9Y2H5 1048 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 TSC22D4Q9Y3Q8 395 aa16.39■□□□□ 0.21
PCGF3-209ENST00000475288 RTCAO00442 366 aaKnown RBP16.38■□□□□ 0.21
PCGF3-209ENST00000475288 TRIM3O75382 744 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-209ENST00000475288 C1QAP02745 245 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 TCP1P17987 556 aaKnown RBP16.38■□□□□ 0.21
PCGF3-209ENST00000475288 GALNSP34059 522 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 DR1Q01658 176 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 TNFRSF17Q02223 184 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 PDIA2Q13087 525 aaKnown RBP16.38■□□□□ 0.21
PCGF3-209ENST00000475288 OR4D1Q15615 310 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 ACSF3Q4G176 576 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-209ENST00000475288 DEPDC1Q5TB30 811 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 KHDRBS2Q5VWX1 349 aaKnown RBP16.38■□□□□ 0.21
PCGF3-209ENST00000475288 OR4C11Q6IEV9 310 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 MED27Q6P2C8 311 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 SLC29A4Q7RTT9 530 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 PM20D2Q8IYS1 436 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 NAXEQ8NCW5 288 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 OR10G3Q8NGC4 313 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 ESAMQ96AP7 390 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 UBXN10Q96LJ8 280 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 KRT12Q99456 494 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 WWTR1Q9GZV5 400 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 PRDM14Q9GZV8 571 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 DMRT3Q9NQL9 472 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 CD274Q9NZQ7 290 aa16.38■□□□□ 0.21
PCGF3-209ENST00000475288 CAPN14A8MX76 684 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 ALOX15P16050 662 aaPredicted RBP16.37■□□□□ 0.21
PCGF3-209ENST00000475288 BMP5P22003 454 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 TLX1P31314 330 aaPredicted RBP16.37■□□□□ 0.21
PCGF3-209ENST00000475288 ADAM8P78325 824 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 SORDQ00796 357 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 CRYZQ08257 329 aaKnown RBP16.37■□□□□ 0.21
PCGF3-209ENST00000475288 SLAMF1Q13291 335 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 FASTKD3Q14CZ7 662 aaKnown RBP16.37■□□□□ 0.21
PCGF3-209ENST00000475288 EBPQ15125 230 aaKnown RBP16.37■□□□□ 0.21
PCGF3-209ENST00000475288 ZKSCAN8Q15776 578 aaPredicted RBP16.37■□□□□ 0.21
PCGF3-209ENST00000475288 FBXO48Q5FWF7 155 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 PRAMEF20Q5VT98 475 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 GPR180Q86V85 440 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 FAM13CQ8NE31 585 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 OR7G3Q8NG95 312 aa16.37■□□□□ 0.21
PCGF3-209ENST00000475288 ZNF597Q96LX8 424 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms