RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 PNMA8BQ9ULN7 279 aaPredicted RBP20.58■□□□□ 0.89
CCM2-206ENST00000474617 ATG4BQ9Y4P1 393 aa20.58■□□□□ 0.89
CCM2-206ENST00000474617 LYVE1Q9Y5Y7 322 aa20.58■□□□□ 0.89
CCM2-206ENST00000474617 SPACA6W5XKT8 324 aa20.58■□□□□ 0.89
CCM2-206ENST00000474617 PLXND1Q9Y4D7 1925 aa20.58■□□□□ 0.89
CCM2-206ENST00000474617 REV3LO60673 3130 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 GSAPA4D1B5 854 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 OR6C74A6NCV1 312 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 HMGN4O00479 90 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 CLIC3O95833 236 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 ETS2P15036 469 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 JUNBP17275 347 aaPredicted RBP20.58■□□□□ 0.88
CCM2-206ENST00000474617 PAX7P23759 505 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 ISL1P61371 349 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 TP53BP2Q13625 1128 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 FZD2Q14332 565 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 FBXO42Q6P3S6 717 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 B3GNT6Q6ZMB0 384 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 Q6ZS52 159 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 CYP4Z1Q86W10 505 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 OOSP2Q86WS3 158 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 SDR16C5Q8N3Y7 309 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 ZNF420Q8TAQ5 688 aaPredicted RBP20.58■□□□□ 0.88
CCM2-206ENST00000474617 BAHD1Q8TBE0 780 aaPredicted RBP20.58■□□□□ 0.88
CCM2-206ENST00000474617 UTP15Q8TED0 518 aaKnown RBP20.58■□□□□ 0.88
CCM2-206ENST00000474617 TMEM19Q96HH6 336 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 PITX2Q99697 317 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 LIPT1Q9Y234 373 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 POFUT2Q9Y2G5 429 aa20.58■□□□□ 0.88
CCM2-206ENST00000474617 MYOCOSA0A1B0GUC4 107 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 SCAMP1O15126 338 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 EMC8O43402 210 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 B3GALT2O43825 422 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 NELFEP18615 380 aaKnown RBP20.57■□□□□ 0.88
CCM2-206ENST00000474617 PRKACGP22612 351 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 CRHBPP24387 322 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 CERS1P27544 350 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 CRISP3P54108 245 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 BTN3A2P78410 334 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 TNFRSF17Q02223 184 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 TUBA3CQ13748 450 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 NIPAL1Q6NVV3 410 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 RNF44Q7L0R7 432 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 TAF8Q7Z7C8 310 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 GALNT15Q8N3T1 639 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 AMER3Q8N944 861 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 CHDHQ8NE62 594 aaPredicted RBP20.57■□□□□ 0.88
CCM2-206ENST00000474617 NR4A3Q92570 626 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 RSL24D1Q9UHA3 163 aaKnown RBP20.57■□□□□ 0.88
CCM2-206ENST00000474617 NDRG4Q9ULP0 352 aaKnown RBP20.57■□□□□ 0.88
CCM2-206ENST00000474617 PCDHGA8Q9Y5G5 932 aa20.57■□□□□ 0.88
CCM2-206ENST00000474617 MFN2O95140 757 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 BCHEP06276 602 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 MAGP20916 626 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 CD72P21854 359 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 CD27P26842 260 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 PIGAP37287 484 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 TEKQ02763 1124 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 MICAQ29983 383 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 ARMC6Q6NXE6 501 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 TNFAIP8L2Q6P589 184 aaPredicted RBP20.56■□□□□ 0.88
CCM2-206ENST00000474617 FAM20CQ8IXL6 584 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 LGI4Q8N135 537 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 TTC29Q8NA56 475 aaPredicted RBP20.56■□□□□ 0.88
CCM2-206ENST00000474617 FLCNQ8NFG4 579 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 OR4C15Q8NGM1 316 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 SOX17Q9H6I2 414 aaPredicted RBP20.56■□□□□ 0.88
CCM2-206ENST00000474617 TRIM45Q9H8W5 580 aaPredicted RBP20.56■□□□□ 0.88
CCM2-206ENST00000474617 ZNF556Q9HAH1 456 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 NTMQ9P121 344 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 KCND3Q9UK17 655 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 FBXW2Q9UKT8 454 aa20.56■□□□□ 0.88
CCM2-206ENST00000474617 IGHV1OR15-9A0A0B4J2B8 117 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 A0A0G2JN53 185 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 E9PQ18 207 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 ABCB7O75027 752 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 CPNE6O95741 557 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 POLR2CP19387 275 aaPredicted RBP20.55■□□□□ 0.88
CCM2-206ENST00000474617 MATN1P21941 496 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 SPIBQ01892 262 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 ELOCQ15369 112 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 LEXMQ3ZCV2 418 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 FCRL6Q6DN72 434 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 ZNF605Q86T29 641 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 ZNF354BQ96LW1 612 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 NPLQ9BXD5 320 aaPredicted RBP20.55■□□□□ 0.88
CCM2-206ENST00000474617 CCNB1IP1Q9NPC3 277 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 WNT16Q9UBV4 365 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 TPRKBQ9Y3C4 175 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 GMPPBQ9Y5P6 360 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 GPC6Q9Y625 555 aaPredicted RBP20.55■□□□□ 0.88
CCM2-206ENST00000474617 CEPT1Q9Y6K0 416 aa20.55■□□□□ 0.88
CCM2-206ENST00000474617 A0A0G2JPF8 293 aa20.54■□□□□ 0.88
CCM2-206ENST00000474617 CCDC160A6NGH7 325 aa20.54■□□□□ 0.88
CCM2-206ENST00000474617 DUXAA6NLW8 204 aa20.54■□□□□ 0.88
CCM2-206ENST00000474617 HNRNPCL2B2RXH8 293 aa20.54■□□□□ 0.88
CCM2-206ENST00000474617 HNRNPCL3B7ZW38 293 aa20.54■□□□□ 0.88
CCM2-206ENST00000474617 C4orf51C9J302 202 aa20.54■□□□□ 0.88
CCM2-206ENST00000474617 CASC3O15234 703 aaKnown RBP20.54■□□□□ 0.88
CCM2-206ENST00000474617 SLC28A2O43868 658 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms