RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 OCC1Q8TAD7 63 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 IGDCC4Q8TDY8 1250 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 SNAPC3Q92966 411 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 TECTBQ96PL2 329 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PAFAH2Q99487 392 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.31□□□□□ -1.88
UBR3-208ENST00000474426 NPLQ9BXD5 320 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 SLITRK2Q9H156 845 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 SEMA4BQ9NPR2 832 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 PIGVQ9NUD9 493 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 SPHK1Q9NYA1 384 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PLK2Q9NYY3 685 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 CNOT2Q9NZN8 540 aaKnown RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 GLS2Q9UI32 602 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 MSRAQ9UJ68 235 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 OSGIN1Q9UJX0 560 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 IKZF3Q9UKT9 509 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 JCADQ9P266 1359 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 POLA1P09884 1462 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 SOWAHBA6NEL2 793 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 TBC1D3FA6NER0 549 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 NPIPB13A6NJU9 1138 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 VSTM2BA6NLU5 285 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 NPIPB4C9JG80 1138 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 G3V2T6 193 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 IFNL4K9M1U5 179 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PIK3R2O00459 728 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 EREGO14944 169 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 RGS5O15539 181 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 KLK10O43240 276 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PDE9AO76083 593 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 SEC24AO95486 1093 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 ENO1P06733 434 aaKnown RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 CD22P20273 847 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PGM1P36871 562 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 MAGEA2P43356 314 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 GPR12P47775 334 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 NUDT6P53370 316 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PTTG1IPP53801 180 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 ELLP55199 621 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 CSNK2A1P68400 391 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 PLAURQ03405 335 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 AKIRIN2Q53H80 203 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 SLC25A53Q5H9E4 307 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 C9orf64Q5T6V5 341 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 DCAF12L1Q5VU92 463 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 OTUD1Q5VV17 481 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 PRAMEF18Q5VWM3 479 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 FAM91A1Q658Y4 838 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 VASNQ6EMK4 673 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 KIAA0930Q6ICG6 404 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 DLEU7Q6UYE1 221 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 RBMS3Q6XE24 437 aaKnown RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 FUNDC1Q8IVP5 155 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 C2orf73Q8N5S3 287 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 PQLC3Q8N755 202 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 CSNK2A3Q8NEV1 391 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 TMEM185AQ8NFB2 350 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 NLGN2Q8NFZ4 835 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 RHEBL1Q8TAI7 183 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 STOML3Q8TAV4 291 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 RIT1Q92963 219 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PIGTQ969N2 578 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PSMG2Q969U7 264 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 TM4SF18Q96CE8 201 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 CPNE2Q96FN4 548 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 PRR11Q96HE9 360 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 HRASLS5Q96KN8 279 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 BTBD10Q9BSF8 475 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 ROPN1BQ9BZX4 212 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 PKIBQ9C010 78 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 EPHX3Q9H6B9 360 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 DCLRE1BQ9H816 532 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 LYRM4Q9HD34 91 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 EQTNQ9NQ60 294 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PRDM6Q9NQX0 595 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PTTG3PQ9NZH4 202 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PAK5Q9P286 719 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 REXO2Q9Y3B8 237 aaKnown RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 TSSC4Q9Y5U2 329 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 NPHP3Q7Z494 1330 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 NCOA2Q15596 1464 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PRAMEF22A3QJZ6 481 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 KLF11O14901 512 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 ZBTB5O15062 677 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 INPP4BO15327 924 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 ZNF208O43345 1280 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 GDF9O60383 454 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 SDC3O75056 442 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 CTDNEP1O95476 244 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 TXNDC12O95881 172 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 RHOP08100 348 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 SPARCP09486 303 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 TATP17735 454 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 MARCKSP29966 332 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 ERP29P30040 261 aaKnown RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 PRDX6P30041 224 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PMELP40967 661 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 JAK3P52333 1124 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 TMEM115Q12893 351 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms