RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KIAA0040Q15053 153 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 C6orf163Q5TEZ5 329 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 ASB18Q6ZVZ8 466 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 CRLF3Q8IUI8 442 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 ST13P4Q8IZP2 240 aaPredicted RBP11.6□□□□□ -0.55
DDX56-209ENST00000473924 MMP21Q8N119 569 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 AMER2Q8N7J2 671 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 FNDC5Q8NAU1 212 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 B3GNT7Q8NFL0 401 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 OR14A16Q8NHC5 309 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 TM9SF4Q92544 642 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 PPWD1Q96BP3 646 aaKnown RBP11.6□□□□□ -0.55
DDX56-209ENST00000473924 KLHL29Q96CT2 875 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 ZNF552Q9H707 407 aaPredicted RBP11.6□□□□□ -0.55
DDX56-209ENST00000473924 MMP25Q9NPA2 562 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 MED4Q9NPJ6 270 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 MIEF1Q9NQG6 463 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 C5AR2Q9P296 337 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 HEY2Q9UBP5 337 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 MARCOQ9UEW3 520 aaPredicted RBP11.6□□□□□ -0.55
DDX56-209ENST00000473924 GIMAP2Q9UG22 337 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 TEKT2Q9UIF3 430 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 RALYQ9UKM9 306 aaKnown RBP11.6□□□□□ -0.55
DDX56-209ENST00000473924 UTS2RQ9UKP6 389 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 ZNF451Q9Y4E5 1061 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 PCDHGB7Q9Y5F8 929 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 ZNF780BQ9Y6R6 833 aa11.6□□□□□ -0.55
DDX56-209ENST00000473924 SLCO1B7G3V0H7 640 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 K7EM74 188 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 JUNP05412 331 aaKnown RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 SLC35E2P0CK97 266 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 PORP16435 677 aaPredicted RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 CLCN2P51788 898 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 OCRLQ01968 901 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 MAD2L1Q13257 205 aaPredicted RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 CRB2Q5IJ48 1285 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 C6orf136Q5SQH8 315 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 ISLR2Q6UXK2 745 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 LINC00696Q6ZRV3 163 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 IKBIPQ70UQ0 350 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 ARFGAP2Q8N6H7 521 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 MORN4Q8NDC4 146 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 NFAM1Q8NET5 270 aaPredicted RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 PTPMT1Q8WUK0 201 aaPredicted RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 RIT1Q92963 219 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 NCLNQ969V3 563 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 EXOSC8Q96B26 276 aaKnown RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 VMP1Q96GC9 406 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 BBC3Q96PG8 261 aaPredicted RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 SMAD5Q99717 465 aaKnown RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 C1orf50Q9BV19 199 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 DEFB126Q9BYW3 111 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 NUF2Q9BZD4 464 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 OR8D2Q9GZM6 311 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 EPS8L2Q9H6S3 715 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 MYNNQ9NPC7 610 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 GIMAP4Q9NUV9 329 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 COPS7AQ9UBW8 275 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 CES1P1Q9UKY3 287 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 ENTPD4Q9Y227 616 aa11.59□□□□□ -0.55
DDX56-209ENST00000473924 WBP11Q9Y2W2 641 aaKnown RBP11.59□□□□□ -0.55
DDX56-209ENST00000473924 TRBV11-1A0A0K0K1C0 115 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 TRPC5OSA6NMA1 111 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 HDAC3O15379 428 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 DPM1O60762 260 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 VPS4BO75351 444 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 PDGFAP04085 211 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 CPMP14384 443 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 SDC1P18827 310 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 CSNK2A2P19784 350 aaPredicted RBP11.58□□□□□ -0.56
DDX56-209ENST00000473924 DDCP20711 480 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 NT5EP21589 574 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 TACR1P25103 407 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 FEN1P39748 380 aaKnown RBP11.58□□□□□ -0.56
DDX56-209ENST00000473924 ASMTP46597 345 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 HK2P52789 917 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 ZNF267Q14586 743 aaPredicted RBP11.58□□□□□ -0.56
DDX56-209ENST00000473924 ZNF750Q32MQ0 723 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 ABHD17BQ5VST6 288 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 B3GNTL1Q67FW5 361 aaPredicted RBP11.58□□□□□ -0.56
DDX56-209ENST00000473924 FAM71E1Q6IPT2 247 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 FAM180BQ6P0A1 224 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 HPS6Q86YV9 775 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 TICAM1Q8IUC6 712 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 SAMD14Q8IZD0 417 aaPredicted RBP11.58□□□□□ -0.56
DDX56-209ENST00000473924 KIF2BQ8N4N8 673 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 ZADH2Q8N4Q0 377 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 SLC5A8Q8N695 610 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 CLHC1Q8NHS4 586 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 PIWIL2Q8TC59 973 aaKnown RBP11.58□□□□□ -0.56
DDX56-209ENST00000473924 SLC2A12Q8TD20 617 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 ELP5Q8TE02 316 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 PSMF1Q92530 271 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 GFM2Q969S9 779 aaKnown RBP11.58□□□□□ -0.56
DDX56-209ENST00000473924 EGLN2Q96KS0 407 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 ART5Q96L15 291 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 FCRL1Q96LA6 429 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 ZNF354BQ96LW1 612 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 TSSK3Q96PN8 268 aa11.58□□□□□ -0.56
DDX56-209ENST00000473924 CNPPD1Q9BV87 410 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms