RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	MS4A12	Q9NXJ0	267 aa		12.5	□□□□□ -0.41
BRAT1-205	ENST00000473879	EHD3	Q9NZN3	535 aa		12.5	□□□□□ -0.41
BRAT1-205	ENST00000473879	TUBD1	Q9UJT1	453 aa		12.5	□□□□□ -0.41
BRAT1-205	ENST00000473879	POLH	Q9Y253	713 aa		12.5	□□□□□ -0.41
BRAT1-205	ENST00000473879	NAALAD2	Q9Y3Q0	740 aa		12.5	□□□□□ -0.41
BRAT1-205	ENST00000473879	C1orf226	A1L170	272 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	CDC14C	A4D256	554 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	AIM2	O14862	343 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	GYG2	O15488	501 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	NSA2	O95478	260 aa	Known RBP	12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	NR2F6	P10588	404 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	TLX1	P31314	330 aa	Predicted RBP	12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	ALDH9A1	P49189	494 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	RPS18	P62269	152 aa	Known RBP	12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	TNFRSF17	Q02223	184 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	MAPKAPK3	Q16644	382 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	SPRED3	Q2MJR0	410 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	NDUFAF5	Q5TEU4	345 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	ANXA8L1	Q5VT79	327 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	FAM198B	Q6UWH4	519 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	HACD2	Q6Y1H2	254 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	ENDOV	Q8N8Q3	282 aa	Known RBP	12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	VPS37A	Q8NEZ2	397 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	DNAJB8	Q8NHS0	232 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	ADAMTS18	Q8TE60	1221 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	THAP4	Q8WY91	577 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	VPS33A	Q96AX1	596 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	KLHL29	Q96CT2	875 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	C10orf90	Q96M02	699 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	GBP5	Q96PP8	586 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	OR52E6	Q96RD3	313 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	NPAS2	Q99743	824 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	BTBD10	Q9BSF8	475 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	NDC1	Q9BTX1	674 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	DUSP26	Q9BV47	211 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	SLC52A3	Q9NQ40	469 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	PRDM9	Q9NQV7	894 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	TEX10	Q9NXF1	929 aa	Predicted RBP	12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	SH3BP4	Q9P0V3	963 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	FBXW2	Q9UKT8	454 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	DAPP1	Q9UN19	280 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	MRPS2	Q9Y399	296 aa	Known RBP	12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	ASB4	Q9Y574	426 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	KCNMB2	Q9Y691	235 aa		12.49	□□□□□ -0.41
BRAT1-205	ENST00000473879	COL6A6	A6NMZ7	2263 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	GABRR3	A8MPY1	467 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879		C9J4A7	227 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879		H0YIG0	161 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	FBP2	O00757	339 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	MED26	O95402	600 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	B3GALT4	O96024	378 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	NPPA	P01160	153 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	CD63	P08962	238 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	CD1E	P15812	388 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	CPN2	P22792	545 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	DGKQ	P52824	942 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	LIM2	P55344	173 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	HNRNPH2	P55795	449 aa	Known RBP	12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	DCD	P81605	110 aa	Known RBP	12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	KCNAB2	Q13303	367 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	NFYC	Q13952	458 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	NCF4	Q15080	339 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	TRMT5	Q32P41	509 aa	Known RBP	12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	RINL	Q6ZS11	566 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	RIPOR1	Q6ZS17	1223 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	TICAM1	Q8IUC6	712 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	ARHGAP24	Q8N264	748 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	DPP10	Q8N608	796 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	AMER3	Q8N944	861 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	RBM15B	Q8NDT2	890 aa	Known RBP	12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	OR7A2P	Q8NGA2	310 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	OR9A4	Q8NGU2	314 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	COQ8B	Q96D53	544 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	ITCH	Q96J02	903 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	SLC25A18	Q9H1K4	315 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	CUTC	Q9NTM9	273 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	DHCR7	Q9UBM7	475 aa	Known RBP	12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	TCFL5	Q9UL49	500 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	CDC14A	Q9UNH5	594 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879	PCDHA9	Q9Y5H5	950 aa		12.48	□□□□□ -0.41
BRAT1-205	ENST00000473879		A0A0A6YYC8	382 aa	Predicted RBP	12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	BLACE	A4D250	179 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	ASPDH	A6ND91	283 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	ZNF860	A6NHJ4	632 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879		B8ZZF3	427 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879		I3L1I5	382 aa	Predicted RBP	12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	SGK494	L7N484	410 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	RNASET2	O00584	256 aa	Known RBP	12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	PROM1	O43490	865 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	RDH16	O75452	317 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	KCNH1	O95259	989 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	AIFM1	O95831	613 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	PIM1	P11309	404 aa	Predicted RBP	12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	HNRNPF	P52597	415 aa	Known RBP	12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	RAB38	P57729	211 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	SNRPN	P63162	240 aa	Known RBP	12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	ACTN3	Q08043	901 aa	Predicted RBP	12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	TLR1	Q15399	786 aa		12.47	□□□□□ -0.41
BRAT1-205	ENST00000473879	C6orf10	Q5SRN2	563 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms