RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TRADDQ15628 312 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 STXBP2Q15833 593 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF79Q15937 498 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 UAP1Q16222 522 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 PTPN20Q4JDL3 420 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 GAGE2EQ4V326 116 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TTMPQ5BVD1 217 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 BEND6Q5SZJ8 279 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CELF3Q5SZQ8 465 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 MARCH8Q5T0T0 291 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 WDR78Q5VTH9 848 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TAF3Q5VWG9 929 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CST9Q5W186 159 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 GAGE2AQ6NT46 116 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 C11orf63Q6NUN7 778 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TTC27Q6P3X3 843 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ALKBH5Q6P6C2 394 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 C1orf122Q6ZSJ8 110 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 HIST3H2AQ7L7L0 130 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 GPR142Q7Z601 462 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ANKRD23Q86SG2 305 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 PHLDB2Q86SQ0 1253 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CTAGE6Q86UF2 777 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 NT5DC3Q86UY8 548 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 RNF168Q8IYW5 571 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 SYCP3Q8IZU3 236 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 C11orf42Q8N5U0 333 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 METTL13Q8N6R0 699 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 KLHDC1Q8N7A1 406 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CEP112Q8N8E3 955 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TEX19Q8NA77 164 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 C1orf131Q8NDD1 294 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 MNS1Q8NEH6 495 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TRPV1Q8NER1 839 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 SPATA4Q8NEY3 305 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 OR6J1Q8NGC5 347 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF564Q8TBZ8 553 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 PRPF31Q8WWY3 499 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 POMGNT1Q8WZA1 660 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 SGCDQ92629 289 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 USP6NLQ92738 828 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 HDAC2Q92769 488 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 FAM149B1Q96BN6 582 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC127Q96BQ5 260 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 DCPSQ96C86 337 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CPB2Q96IY4 423 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 PIWIL1Q96J94 861 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CDHR1Q96JP9 859 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC42Q96M95 316 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC43Q96MW1 224 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 GDAP1L1Q96MZ0 367 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 SPATA33Q96N06 139 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF582Q96NG8 517 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 SPAG5Q96R06 1193 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 NUDCD1Q96RS6 583 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 MAP7D2Q96T17 732 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 PARK7Q99497 189 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 LGMNQ99538 433 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 AGPAT1Q99943 283 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 FAM213AQ9BRX8 229 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 C16orf70Q9BSU1 422 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TIPINQ9BVW5 301 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 FUT8Q9BYC5 575 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 PARD6BQ9BYG5 372 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TSGA10Q9BZW7 698 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 DDX47Q9H0S4 455 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 THAP2Q9H0W7 228 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 SLA2Q9H6Q3 261 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 SMYD3Q9H7B4 428 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM206Q9H813 350 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 A4GALTQ9NPC4 353 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 UBE2TQ9NPD8 197 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ZNHIT6Q9NWK9 470 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 HOXC10Q9NYD6 342 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 RBAKQ9NYW8 714 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 LARSQ9P2J5 1176 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF69Q9UC07 566 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 GAGE2DQ9UEU5 116 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 TUBGCP4Q9UGJ1 667 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CYTH4Q9UIA0 394 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CPSF3Q9UKF6 684 aaKnown RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 GTF3C4Q9UKN8 822 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ZHX1Q9UKY1 873 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 PNMA2Q9UL42 364 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 CORO1CQ9ULV4 474 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-203ENST00000473854 COQ4Q9Y3A0 265 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 ANGPTL3Q9Y5C1 460 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 SAR1BQ9Y6B6 198 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 STYXL1Q9Y6J8 313 aa1.34□□□□□ -2.19
CCDC39-203ENST00000473854 BOD1L1Q8NFC6 3051 aa1.34□□□□□ -2.2
CCDC39-203ENST00000473854 GRIN2DO15399 1336 aa1.34□□□□□ -2.2
CCDC39-203ENST00000473854 MROH7Q68CQ1 1323 aa1.34□□□□□ -2.2
CCDC39-203ENST00000473854 CNOT1A5YKK6 2376 aaKnown RBP1.34□□□□□ -2.2
CCDC39-203ENST00000473854 CACNA1HO95180 2353 aa1.34□□□□□ -2.2
CCDC39-203ENST00000473854 COL1A2P08123 1366 aa1.34□□□□□ -2.2
CCDC39-203ENST00000473854 DSPP15924 2871 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM131Q92545 1883 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 A0A087X0M5 115 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 A0A1B0GX30 115 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ELOVL7A1L3X0 281 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms