RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PIGQQ9BRB3 760 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 MS4A8Q9BY19 250 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 UBQLN3Q9H347 655 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 EXO5Q9H790 373 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 NT5DC2Q9H857 520 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 SLC24A3Q9HC58 644 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 SMYD2Q9NRG4 433 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 B4GALT7Q9UBV7 327 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 OARD1Q9Y530 152 aa8.81□□□□□ -1
MCF2L-223ENST00000473345 TRIM64A6NGJ6 449 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 TUBAL3A6NHL2 446 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 TRIM64BA6NI03 449 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 B4DXG7 233 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 H7C1Q1 480 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 C1QAP02745 245 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 BMP7P18075 431 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 ADSLP30566 484 aaPredicted RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 TIMP3P35625 211 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 ELK3P41970 407 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 RPL21P46778 160 aaKnown RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 HSPA7P48741 367 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 HNRNPH2P55795 449 aaKnown RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 FBXW4P57775 412 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 NKX6-1P78426 367 aaPredicted RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 CDKL1Q00532 357 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 KEAP1Q14145 624 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 FASTKD3Q14CZ7 662 aaKnown RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 OR4D1Q15615 310 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 SPANXN3Q5MJ09 141 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 STEAP4Q687X5 459 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 FAM45BPQ6NSW5 357 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 C22orf34Q6ZV56 151 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 ZC3HC1Q86WB0 502 aaKnown RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 PPIL6Q8IXY8 311 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 TBC1D19Q8N5T2 526 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 ZNF441Q8N8Z8 693 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 ACOT4Q8N9L9 421 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 NUBPLQ8TB37 319 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 FAM45AQ8TCE6 357 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 ZNF473Q8WTR7 871 aaKnown RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 WDR34Q96EX3 536 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 CFAP36Q96G28 342 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 WDYHV1Q96HA8 205 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 FAR2Q96K12 515 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 JSRP1Q96MG2 331 aaPredicted RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 EGFL8Q99944 293 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 ZNF717Q9BY31 904 aaPredicted RBP8.8□□□□□ -1
MCF2L-223ENST00000473345 UGT2B28Q9BY64 529 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 PRDM14Q9GZV8 571 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 CAB39LQ9H9S4 337 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 CHMP2BQ9UQN3 213 aa8.8□□□□□ -1
MCF2L-223ENST00000473345 MPDZO75970 2070 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 C15orf38-AP3S2A0A0A6YYH1 394 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 FAM95CA0A1B0GW59 222 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 MBD3L4A6NDZ8 208 aaPredicted RBP8.79□□□□□ -1
MCF2L-223ENST00000473345 MBD3L3A6NE82 208 aaPredicted RBP8.79□□□□□ -1
MCF2L-223ENST00000473345 MBD3L5A6NJ08 208 aaPredicted RBP8.79□□□□□ -1
MCF2L-223ENST00000473345 EFCAB8A8MWE9 144 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 INAFM1C9JVW0 142 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 SCELO95171 688 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 TGFB1P01137 390 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 CT62P0C5K7 136 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 GNAZP19086 355 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 TNNI3P19429 210 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 PAFAH1B1P43034 410 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 STT3AP46977 705 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 CDK9P50750 372 aaKnown RBP8.79□□□□□ -1
MCF2L-223ENST00000473345 NAGLUP54802 743 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 SLC37A1P57057 533 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 HERVK_113P63132 956 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 ERVK-8P63133 956 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 KCNJ2P63252 427 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 CKAP4Q07065 602 aaKnown RBP8.79□□□□□ -1
MCF2L-223ENST00000473345 KRTAP1-1Q07627 177 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 STX4Q12846 297 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 E2F2Q14209 437 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 EBPQ15125 230 aaKnown RBP8.79□□□□□ -1
MCF2L-223ENST00000473345 PCBP2Q15366 365 aaKnown RBP eCLIP8.79□□□□□ -1
MCF2L-223ENST00000473345 TGFBIQ15582 683 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 NTRK2Q16620 822 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 NSUN5P2Q63ZY6 315 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 VASNQ6EMK4 673 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 TRIM40Q6P9F5 258 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 MMGT1Q8N4V1 131 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 LRRN4CLQ8ND94 238 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 SIMC1Q8NDZ2 872 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 FAM13CQ8NE31 585 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 MNS1Q8NEH6 495 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 SPATA4Q8NEY3 305 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 MBD3L2Q8NHZ7 208 aaPredicted RBP8.79□□□□□ -1
MCF2L-223ENST00000473345 PPP1R14CQ8TAE6 165 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 GNRHR2Q96P88 292 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 ERVK-6Q9BXR3 956 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 TRIM54Q9BYV2 358 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 WWTR1Q9GZV5 400 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 OR51B5Q9H339 312 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 LYRM4Q9HD34 91 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 GALNT8Q9NY28 637 aa8.79□□□□□ -1
MCF2L-223ENST00000473345 ZNF629Q9UEG4 869 aaPredicted RBP8.79□□□□□ -1
MCF2L-223ENST00000473345 ERVK-19Q9WJR5 959 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms