RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 STUB1Q9UNE7 303 aa20.06■□□□□ 0.8
COL18A1-207ENST00000473212 TCF20Q9UGU0 1960 aaKnown RBP20.05■□□□□ 0.8
COL18A1-207ENST00000473212 A0A1W2PQ09 198 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 C5orf58C9J3I9 102 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ZNF670-ZNF695F2Z2N8 137 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 RFXAPO00287 272 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 B4GALT2O60909 372 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 LILRB5O75023 590 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ITGB8P26012 769 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ZNF91Q05481 1191 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 NOGQ13253 232 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ILKQ13418 452 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ZNF805Q5CZA5 627 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 LILRA6Q6PI73 481 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 LRRC56Q8IYG6 542 aaPredicted RBP20.05■□□□□ 0.8
COL18A1-207ENST00000473212 GPR65Q8IYL9 337 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ADGRF3Q8IZF5 1079 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 TCEANCQ8N8B7 351 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 GPR32P1Q8NGA4 272 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 OR4D11Q8NGI4 311 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 LILRB4Q8NHJ6 448 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 SLC38A5Q8WUX1 472 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 MND1Q9BWT6 205 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 TSSK6Q9BXA6 273 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 NLNQ9BYT8 704 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 SRRQ9GZT4 340 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ZBP1Q9H171 429 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 MMP28Q9H239 520 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 WDR70Q9NW82 654 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 HOXC11O43248 304 aaPredicted RBP20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ENDOUP21128 410 aaKnown RBP20.05■□□□□ 0.8
COL18A1-207ENST00000473212 UQCRC2P22695 453 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ELAVL4P26378 380 aaKnown RBP20.05■□□□□ 0.8
COL18A1-207ENST00000473212 IRS1P35568 1242 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 XKP51811 444 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 DAB2P98082 770 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 RUNX1T1Q06455 604 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 NCF4Q15080 339 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 MEDAGQ5VYS4 303 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 HIST2H2AA3Q6FI13 130 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 CASP12Q6UXS9 341 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 GDPGP1Q6ZNW5 385 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 DPPA4Q7L190 304 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 TRIM69Q86WT6 500 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 SLC5A11Q8WWX8 675 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 SNX18Q96RF0 628 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 PHOX2BQ99453 314 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 NDEL1Q9GZM8 345 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 RMI1Q9H9A7 625 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 ZDHHC4Q9NPG8 344 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 BOLA1Q9Y3E2 137 aa20.05■□□□□ 0.8
COL18A1-207ENST00000473212 WASHC1A8K0Z3 465 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 HIDE1A8MVS5 230 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 CHRM5P08912 532 aaPredicted RBP20.04■□□□□ 0.8
COL18A1-207ENST00000473212 ACRP10323 421 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 RACK1P63244 317 aaKnown RBP20.04■□□□□ 0.8
COL18A1-207ENST00000473212 DCST1Q5T197 706 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 CNKSR3Q6P9H4 555 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 WASH2PQ6VEQ5 465 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 DEF8Q6ZN54 512 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 FAM83HQ6ZRV2 1179 aaPredicted RBP20.04■□□□□ 0.8
COL18A1-207ENST00000473212 NANOGP1Q8N7R0 232 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 PDXPQ96GD0 296 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 SGPP1Q9BX95 441 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 CMAHPQ9Y471 501 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 MEIOCA2RUB1 952 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 CDRT1O95170 752 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 CXCL14O95715 111 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 LAG3P18627 525 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 CNTN1Q12860 1018 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 TBRG1Q3YBR2 411 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 TCEAL5Q5H9L2 206 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 TCTN3Q6NUS6 607 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 NXPE4Q6UWF7 544 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 COMTD1Q86VU5 262 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 SLAIN1Q8ND83 568 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 WDR34Q96EX3 536 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 TMEM19Q96HH6 336 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 CAPNS2Q96L46 248 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 RERGLQ9H628 205 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 TDP1Q9NUW8 608 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 NDUFB11Q9NX14 153 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 SSR3Q9UNL2 185 aa20.04■□□□□ 0.8
COL18A1-207ENST00000473212 RPL36Q9Y3U8 105 aaKnown RBP20.04■□□□□ 0.8
COL18A1-207ENST00000473212 A0A0G2JN53 185 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 HYKKA2RU49 373 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 ANKRD34BA5PLL1 514 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 ANKDD1BA6NHY2 528 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 CENPXA8MT69 81 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 PLD2O14939 933 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 TPST2O60704 377 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 DGKGP49619 791 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 SLAMF1Q13291 335 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 LARS2Q15031 903 aaKnown RBP20.03■□□□□ 0.8
COL18A1-207ENST00000473212 TMEM201Q5SNT2 666 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 NANOGNBQ7Z5D8 188 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 IQCF1Q8N6M8 205 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 OR9A1PQ8NGU1 263 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 ING5Q8WYH8 240 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 MTERF3Q96E29 417 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms