RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PPIL3Q9H2H8 161 aaKnown RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 CLMPQ9H6B4 373 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 RBM22Q9NW64 420 aaKnown RBP eCLIP9.63□□□□□ -0.87
APTX-216ENST00000472896 GPR83Q9NYM4 423 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 OR12D3Q9UGF7 316 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 UBQLN2Q9UHD9 624 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 SSR3Q9UNL2 185 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 POFUT2Q9Y2G5 429 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ASB4Q9Y574 426 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 SETXQ7Z333 2677 aaKnown RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 ITPR1Q14643 2758 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 TNRC6BQ9UPQ9 1833 aaKnown RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 PLXNB3Q9ULL4 1909 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ASXL3Q9C0F0 2248 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ARPC4-TTLL3A0A0A6YYG9 625 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 FAM240BA0A1B0GVZ2 78 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 HYKKA2RU49 373 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 FGF10O15520 208 aaPredicted RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 ZNF682O95780 498 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 VIPP01282 170 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 HLA-DQB2P05538 268 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 FAM157BP0CG42 384 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ANXA8P13928 327 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 CD59P13987 128 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ARSBP15848 533 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 HK1P19367 917 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ITPKAP23677 461 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 DDX6P26196 483 aaKnown RBP eCLIP9.63□□□□□ -0.87
APTX-216ENST00000472896 EPHA2P29317 976 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ZNF33BQ06732 778 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 MED22Q15528 200 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 SSX1Q16384 188 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.63□□□□□ -0.87
APTX-216ENST00000472896 FAM174BQ3ZCQ3 159 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 WSCD1Q658N2 575 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 TMEM81Q6P7N7 255 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 SLC23A3Q6PIS1 610 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 CBLL1Q75N03 491 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 RASGRP3Q8IV61 690 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ARHGAP12Q8IWW6 846 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 PGBD5Q8N414 524 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 DTX3Q8N9I9 347 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 KCT2Q8NC54 265 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 SLC37A3Q8NCC5 494 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 VANGL1Q8TAA9 524 aaPredicted RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 METTL6Q8TCB7 284 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 CREB3L4Q8TEY5 395 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 RBPMSQ93062 196 aaKnown RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 FUBP1Q96AE4 644 aaKnown RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 SLC25A46Q96AG3 418 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 CREB3L1Q96BA8 519 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ULK4Q96C45 1275 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 TRMT61AQ96FX7 289 aaKnown RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 DIRAS2Q96HU8 199 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 CELF6Q96J87 481 aaKnown RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 EXOC2Q96KP1 924 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 MED18Q9BUE0 208 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 CLEC4MQ9H2X3 399 aaPredicted RBP9.63□□□□□ -0.87
APTX-216ENST00000472896 OR51B5Q9H339 312 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 WDCPQ9H6R7 721 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ABCB9Q9NP78 766 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 WASH6PQ9NQA3 447 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 MCUBQ9NWR8 336 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 OSER1Q9NX31 292 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ZNF226Q9NYT6 803 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 TAS2R13Q9NYV9 303 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 GALPQ9UBC7 116 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 KIF25Q9UIL4 384 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ZMYM5Q9UJ78 669 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 PILRBQ9UKJ0 227 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 ACSL5Q9ULC5 683 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 MMP17Q9ULZ9 603 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 CRYL1Q9Y2S2 319 aa9.63□□□□□ -0.87
APTX-216ENST00000472896 SCN1AP35498 2009 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 GCN1Q92616 2671 aaKnown RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 RPS10-NUDT3A0A1W2PQS6 291 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 OR5K4A6NMS3 321 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 A8MX80 341 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 H0YC42 278 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 H3BUI4 141 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 E2F3O00716 465 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 TSC22D2O75157 780 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 SNAPC5O75971 98 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 HMGN1P05114 100 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 SLC2A4P14672 509 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 CD9P21926 228 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 SDC2P34741 201 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 SLC6A11P48066 632 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 TPMTP51580 245 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 ERVPABLB-1P60509 514 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 PPP3R1P63098 170 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 ZXDBP98169 803 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 HOXC5Q00444 222 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 TSNQ15631 228 aaKnown RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 MEDAGQ5VYS4 303 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 RNLSQ5VYX0 342 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 KLHL17Q6TDP4 642 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 NLRP8Q86W28 1048 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 SLC44A2Q8IWA5 706 aaPredicted RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 LRRC17Q8N6Y2 441 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms