RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 MRPL9Q9BYD2 267 aaKnown RBP4.4□□□□□ -1.71
CLK1-209ENST00000472679 TSPYL1Q9H0U9 437 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 SP140LQ9H930 580 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 GDF3Q9NR23 364 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 DDX28Q9NUL7 540 aaKnown RBP4.4□□□□□ -1.71
CLK1-209ENST00000472679 ZNF446Q9NWS9 450 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 MAD2L2Q9UI95 211 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 FOXA2Q9Y261 457 aaPredicted RBP4.4□□□□□ -1.71
CLK1-209ENST00000472679 FGD5Q6ZNL6 1462 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 ZNF840PA6NDX5 716 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 RTN2O75298 545 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 CCDC159P0C7I6 412 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 TPBGLP0DKB5 382 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 GP9P14770 177 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 PPP2R1AP30153 589 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 CASP3P42574 277 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 P2RY14Q15391 338 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 PCK2Q16822 640 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 C15orf32Q32M92 178 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 ZNF506Q5JVG8 444 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 RFWD3Q6PCD5 774 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 Q6ZRG5 221 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 TMUB2Q71RG4 321 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 OR1K1Q8NGR3 316 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 OR4F5Q8NH21 305 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 GLYATL1Q969I3 302 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 C5orf30Q96GV9 206 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 PSMB7Q99436 277 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 RBM24Q9BX46 236 aaKnown RBP4.39□□□□□ -1.71
CLK1-209ENST00000472679 DPEP3Q9H4B8 488 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 TEKT2Q9UIF3 430 aa4.39□□□□□ -1.71
CLK1-209ENST00000472679 MRTO4Q9UKD2 239 aaKnown RBP4.39□□□□□ -1.71
CLK1-209ENST00000472679 A0A087WWV3 80 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 BCLAF3A2AJT9 711 aaKnown RBP4.38□□□□□ -1.71
CLK1-209ENST00000472679 GPRIN2O60269 458 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 ZNF354AO60765 605 aaPredicted RBP4.38□□□□□ -1.71
CLK1-209ENST00000472679 KINO60870 393 aaKnown RBP4.38□□□□□ -1.71
CLK1-209ENST00000472679 HMOX1P09601 288 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 FOSL2P15408 326 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 SPRP35270 261 aaPredicted RBP4.38□□□□□ -1.71
CLK1-209ENST00000472679 TKTL1P51854 596 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 NHLRC3Q5JS37 347 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 SLC25A30Q5SVS4 291 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 WDR25Q64LD2 544 aaPredicted RBP4.38□□□□□ -1.71
CLK1-209ENST00000472679 LRRC49Q8IUZ0 686 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 SLC39A11Q8N1S5 342 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 PARP8Q8N3A8 854 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 CARNMT1Q8N4J0 409 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 SAMD12Q8N8I0 201 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 SUMF1Q8NBK3 374 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 OR4A16Q8NH70 328 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 GOLGA5Q8TBA6 731 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 DCLRE1BQ9H816 532 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 SLC25A19Q9HC21 320 aa4.38□□□□□ -1.71
CLK1-209ENST00000472679 ZCCHC3Q9NUD5 404 aaKnown RBP4.38□□□□□ -1.71
CLK1-209ENST00000472679 SH3BGRLO75368 114 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 HERV-K104P63124 156 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 HSPA14Q0VDF9 509 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 TEFQ10587 303 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 PDE7AQ13946 482 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 ZNF491Q8N8L2 437 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 TYMSOSQ8TAI1 123 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 KRT35Q92764 455 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 NTNG2Q96CW9 530 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 CFAP36Q96G28 342 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 JPH2Q9BR39 696 aaPredicted RBP4.37□□□□□ -1.71
CLK1-209ENST00000472679 SLC26A1Q9H2B4 701 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 GPR83Q9NYM4 423 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 ZNF581Q9P0T4 197 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 ABCA7Q8IZY2 2146 aa4.37□□□□□ -1.71
CLK1-209ENST00000472679 UGT1A6P19224 532 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 STIP1P31948 543 aaKnown RBP4.36□□□□□ -1.71
CLK1-209ENST00000472679 LASP1Q14847 261 aaKnown RBP4.36□□□□□ -1.71
CLK1-209ENST00000472679 UNC50Q53HI1 259 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 ARMCX5Q6P1M9 558 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 HIPK1Q86Z02 1210 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 LINC00612Q8N6U2 182 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 OR6M1Q8NGM8 313 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 KIAA1524Q8TCG1 905 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 SNX21Q969T3 373 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 C16orf58Q96GQ5 468 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 PRAM1Q96QH2 718 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 FUNDC2Q9BWH2 189 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 DIMT1Q9UNQ2 313 aaKnown RBP4.36□□□□□ -1.71
CLK1-209ENST00000472679 MRPL11Q9Y3B7 192 aaKnown RBP4.36□□□□□ -1.71
CLK1-209ENST00000472679 SNX5Q9Y5X3 404 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 KIF7Q2M1P5 1343 aa4.36□□□□□ -1.71
CLK1-209ENST00000472679 YJEFN3A6XGL0 299 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 SLC28A1O00337 649 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 FAM200BP0CF97 657 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 ELK3P41970 407 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 CSRP3P50461 194 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 EMC2Q15006 297 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 KRT31Q15323 416 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 HFEQ30201 348 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 MPPE1Q53F39 396 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 SEL1L3Q68CR1 1132 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 UNC45BQ8IWX7 931 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 SPAG16Q8N0X2 631 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 ICA1LQ8NDH6 482 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms