RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ENO2P09104 434 aaPredicted RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 FREM3P0C091 2139 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 PGAM1P18669 254 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 PTMSP20962 102 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 STXBP1P61764 594 aaKnown RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 CRYZQ08257 329 aaKnown RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 DUSP8Q13202 625 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 MPEG1Q2M385 716 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 ACSF3Q4G176 576 aaPredicted RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 HP1BP3Q5SSJ5 553 aaPredicted RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 RNASEH2BQ5TBB1 312 aaKnown RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 FNDC7Q5VTL7 733 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 SLC22A10Q63ZE4 541 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 TMEM64Q6YI46 380 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 MAATS1Q7Z4T9 603 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 RASGEF1CQ8N431 466 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 GPATCH11Q8N954 259 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 OR10G3Q8NGC4 313 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 OR14A16Q8NHC5 309 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 MAIP1Q8WWC4 291 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 ATL1Q8WXF7 558 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 CCT6BQ92526 530 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 UCN3Q969E3 161 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 MAGOHBQ96A72 148 aaKnown RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 RHBDF1Q96CC6 855 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 SENP5Q96HI0 755 aaPredicted RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 SERINC2Q96SA4 455 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 PIP5K1AQ99755 562 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 REXO4Q9GZR2 422 aaKnown RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 ZFP64Q9NPA5 681 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 LZTFL1Q9NQ48 299 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 JKAMPQ9P055 326 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 CNOT11Q9UKZ1 510 aaKnown RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 EIF3LQ9Y262 564 aaKnown RBP8.55□□□□□ -1.04
VCL-204ENST00000472585 PCDHGB3Q9Y5G1 929 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 DSCAMO60469 2012 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 CASKO14936 926 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 SIAH2O43255 324 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 FGF17O60258 216 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 SH3BGRLO75368 114 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 TRIM3O75382 744 aaPredicted RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 ACSL3O95573 720 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 IL2RAP01589 272 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 HRGP04196 525 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 ZNF37AP17032 561 aaPredicted RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 TNNI3P19429 210 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 IVDP26440 423 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 SLCO1A2P46721 670 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 MTTPP55157 894 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 IGLV3-21P80748 117 aaPredicted RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 SORDQ00796 357 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 FOXF2Q12947 444 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 TSNQ15631 228 aaKnown RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 CYP1B1Q16678 543 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 BBS9Q3SYG4 887 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 DCST1Q5T197 706 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 CCDC137Q6PK04 289 aaKnown RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 OPN5Q6U736 354 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 PLXDC2Q6UX71 529 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 GALNT7Q86SF2 657 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 TXLNBQ8N3L3 684 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 FBXW8Q8N3Y1 598 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 SPATA6LQ8N4H0 392 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 DAZLQ92904 295 aaKnown RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 NTNG2Q96CW9 530 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 SPACA9Q96E40 222 aaPredicted RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 PERPQ96FX8 193 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 CERS2Q96G23 380 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 TMEM79Q9BSE2 394 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 SORBS1Q9BX66 1292 aaKnown RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 TRIM54Q9BYV2 358 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 NT5DC2Q9H857 520 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 HOMER3Q9NSC5 361 aa8.54□□□□□ -1.04
VCL-204ENST00000472585 ZNF629Q9UEG4 869 aaPredicted RBP8.54□□□□□ -1.04
VCL-204ENST00000472585 ANK3Q12955 4377 aaKnown RBP8.53□□□□□ -1.04
VCL-204ENST00000472585 AHRRA9YTQ3 701 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 H2AFYO75367 372 aaKnown RBP8.53□□□□□ -1.04
VCL-204ENST00000472585 PRKRAO75569 313 aaKnown RBP8.53□□□□□ -1.04
VCL-204ENST00000472585 PIAS1O75925 651 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 WDR47O94967 919 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 WISP3O95389 354 aaPredicted RBP8.53□□□□□ -1.04
VCL-204ENST00000472585 C1QAP02745 245 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 GNAZP19086 355 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 ATP5A1P25705 553 aaKnown RBP8.53□□□□□ -1.04
VCL-204ENST00000472585 TIMP3P35625 211 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 GMPRP36959 345 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 KCNC1P48547 511 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 TAS2R39P59534 338 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 CDKL1Q00532 357 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 STX4Q12846 297 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 DOC2AQ14183 400 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 EFTUD2Q15029 972 aaKnown RBP eCLIP8.53□□□□□ -1.044e-6■■■□□ 19.1
VCL-204ENST00000472585 SPANXN3Q5MJ09 141 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 VASNQ6EMK4 673 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 PPIL6Q8IXY8 311 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 RNF175Q8N4F7 328 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 ACOT4Q8N9L9 421 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 OR5L2Q8NGL0 311 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 NUBPLQ8TB37 319 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms