RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ZNF160Q9HCG1 818 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 MKKSQ9NPJ1 570 aaPredicted RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 PRDM7Q9NQW5 492 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 SEMA3GQ9NS98 782 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 C14orf105Q9NVL8 296 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 C3orf18Q9UK00 162 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 NXT1Q9UKK6 140 aaKnown RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 TMEM114B3SHH9 223 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 EEDO75530 441 aaKnown RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 SEMA3DO95025 777 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 BMP10O95393 424 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 IGHEP01854 428 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ALPPP05187 535 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 UROSP10746 265 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 COX6A1P12074 109 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 HSD3B1P14060 373 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 HIST1H1TP22492 207 aaPredicted RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 ATP5A1P25705 553 aaKnown RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 HSD3B2P26439 372 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 BSGP35613 385 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 SLC1A6P48664 564 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 RAB38P57729 211 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ABCE1P61221 599 aaKnown RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 PPP2R2AP63151 447 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 EEF1A2Q05639 463 aaKnown RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 BST1Q10588 318 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 CSTF3Q12996 717 aaKnown RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 RUNX2Q13950 521 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ABRAXAS2Q15018 415 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 SH2D4BQ5SQS7 431 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 KANK2Q63ZY3 851 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 OR4C11Q6IEV9 310 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 IGFL2Q6UWQ7 119 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 LINC00696Q6ZRV3 163 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 NUDT13Q86X67 352 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ZADH2Q8N4Q0 377 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ACOT4Q8N9L9 421 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 CATSPER1Q8NEC5 780 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 PSMF1Q92530 271 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 NACC2Q96BF6 587 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 SERINC2Q96SA4 455 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 WDR77Q9BQA1 342 aaPredicted RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 ZNF717Q9BY31 904 aaPredicted RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 MRPL1Q9BYD6 325 aaKnown RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 ACPTQ9BZG2 426 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 TGIF2Q9GZN2 237 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ROGDIQ9GZN7 287 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 C20orf27Q9GZN8 174 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ILKAPQ9H0C8 392 aaPredicted RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 PSD3Q9NYI0 1048 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ZDHHC2Q9UIJ5 367 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 ERRFI1Q9UJM3 462 aaPredicted RBP8.57□□□□□ -1.04
SMC4-213ENST00000472282 PTGDR2Q9Y5Y4 395 aa8.57□□□□□ -1.04
SMC4-213ENST00000472282 SVILO95425 2214 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 A0A0A6YYD5 115 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 A1L4Q6 167 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 OR2W5A6NFC9 320 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 IDSB3KWA1 339 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 PSMD12O00232 456 aaPredicted RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 SKAP2O75563 359 aaPredicted RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 CDC123O75794 336 aaPredicted RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 SCELO95171 688 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 HPP00738 406 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 FHP07954 510 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 RNH1P13489 461 aaKnown RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 ACPPP15309 386 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 GRK2P25098 689 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 TSFMP43897 325 aaKnown RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 ARFIP1P53367 373 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 LIM2P55344 173 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 HMGCS1Q01581 520 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 ZNF33BQ06732 778 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 STX3Q13277 289 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 IMPG1Q17R60 797 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 MINDY4Q4G0A6 757 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 COMMD6Q7Z4G1 85 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 WFDC8Q8IUA0 241 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 CLYBLQ8N0X4 340 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 METTL4Q8N3J2 472 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 C1orf52Q8N6N3 182 aaKnown RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 ZNF781Q8N8C0 355 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 GBP7Q8N8V2 638 aaPredicted RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 FAM47BQ8NA70 645 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 SSC4DQ8WTU2 575 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 TWIST2Q8WVJ9 160 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 TBC1D20Q96BZ9 403 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 OR1F2PQ96R84 312 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 CSF3RQ99062 836 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 SORT1Q99523 831 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 BARD1Q99728 777 aaKnown RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 MAPKAP1Q9BPZ7 522 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 NPLQ9BXD5 320 aaPredicted RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 VN1R1Q9GZP7 353 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 LHPPQ9H008 270 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 TUBB1Q9H4B7 451 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 CLK4Q9HAZ1 481 aaKnown RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 LANCL2Q9NS86 450 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 AHSPQ9NZD4 102 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 PLEKHB1Q9UF11 243 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms