RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF717Q9BY31 904 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-213ENST00000471978 ACSS3Q9H6R3 686 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 IL1RL2Q9HB29 575 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 LYARQ9NX58 379 aaKnown RBP20.84■□□□□ 0.93
C9orf3-213ENST00000471978 RNF11Q9Y3C5 154 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 POLQO75417 2590 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 NPIPA2E9PIF3 369 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 NPIPA3F8WFD2 350 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 CCL3P10147 92 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 BSGP35613 385 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 DNASE1L1P49184 302 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 NEK2P51955 445 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 CUL3Q13618 768 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 EMC4Q5J8M3 183 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 METTL2BQ6P1Q9 378 aaKnown RBP20.83■□□□□ 0.93
C9orf3-213ENST00000471978 CYP20A1Q6UW02 462 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 ST13P4Q8IZP2 240 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-213ENST00000471978 TMEM251Q8N6I4 163 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 L3MBTL4Q8NA19 623 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 SLC22A8Q8TCC7 542 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 DOK4Q8TEW6 326 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 CNPPD1Q9BV87 410 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 DDX31Q9H8H2 851 aaKnown RBP20.83■□□□□ 0.93
C9orf3-213ENST00000471978 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.83■□□□□ 0.93
C9orf3-213ENST00000471978 ASB4Q9Y574 426 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 ZNF407Q9C0G0 2248 aa20.83■□□□□ 0.93
C9orf3-213ENST00000471978 A0A0A6YYD5 115 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 WASHC1A8K0Z3 465 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 TMPRSS11DO60235 418 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 OR10H2O60403 315 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 CLDN9O95484 217 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 GPR75O95800 540 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 FAM58BPP0C7Q3 252 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 SSTR2P30874 369 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 MAGEA5P43359 124 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 ZNF791Q3KP31 576 aaPredicted RBP20.82■□□□□ 0.92
C9orf3-213ENST00000471978 TECRLQ5HYJ1 363 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 MRM1Q6IN84 353 aaKnown RBP20.82■□□□□ 0.92
C9orf3-213ENST00000471978 PLD6Q8N2A8 252 aaKnown RBP20.82■□□□□ 0.92
C9orf3-213ENST00000471978 FAM109AQ8N4B1 249 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 RPRMLQ8N4K4 120 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 WDR20Q8TBZ3 569 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 ASB5Q8WWX0 329 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 RND1Q92730 232 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 ATP6V1E2Q96A05 226 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 PELOQ9BRX2 385 aaKnown RBP20.82■□□□□ 0.92
C9orf3-213ENST00000471978 NOL11Q9H8H0 719 aaKnown RBP20.82■□□□□ 0.92
C9orf3-213ENST00000471978 ZNF358Q9NW07 568 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 TUBA8Q9NY65 449 aaPredicted RBP20.82■□□□□ 0.92
C9orf3-213ENST00000471978 PSD3Q9NYI0 1048 aa20.82■□□□□ 0.92
C9orf3-213ENST00000471978 MTRF1LQ9UGC7 380 aaKnown RBP20.82■□□□□ 0.92
C9orf3-213ENST00000471978 IQANK1A0A1B0GTG1 560 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 A0A1W2PR48 441 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 GLOD5A6NK44 160 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 FOXE1O00358 373 aaPredicted RBP20.81■□□□□ 0.92
C9orf3-213ENST00000471978 URI1O94763 535 aaPredicted RBP20.81■□□□□ 0.92
C9orf3-213ENST00000471978 IGHG3P01860 377 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 NR2F6P10588 404 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 ARL1P40616 181 aaPredicted RBP20.81■□□□□ 0.92
C9orf3-213ENST00000471978 HERVK_113P63132 956 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 ERVK-8P63133 956 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 FOXO1Q12778 655 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 ZNF267Q14586 743 aaPredicted RBP20.81■□□□□ 0.92
C9orf3-213ENST00000471978 GXYLT1Q4G148 440 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 SLC22A10Q63ZE4 541 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 NUDT13Q86X67 352 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 RELL1Q8IUW5 271 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 SLC15A4Q8N697 577 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 PTGR2Q8N8N7 351 aaPredicted RBP20.81■□□□□ 0.92
C9orf3-213ENST00000471978 OR5M9Q8NGP3 310 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 RIT1Q92963 219 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 PHF21BQ96EK2 531 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 CDK15Q96Q40 435 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 GAL3ST4Q96RP7 486 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 SMC6Q96SB8 1091 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 ERVK-6Q9BXR3 956 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 ENKD1Q9H0I2 346 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 WDR41Q9HAD4 459 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 PNPLA3Q9NST1 481 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 ERVK-19Q9WJR5 959 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 RNF6Q9Y252 685 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 LIPGQ9Y5X9 500 aa20.81■□□□□ 0.92
C9orf3-213ENST00000471978 TEP1Q99973 2627 aaKnown RBP20.8■□□□□ 0.92
C9orf3-213ENST00000471978 EML6Q6ZMW3 1958 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 ATP6AP2A0A1C7CYW4 349 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 OR14I1A6ND48 311 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 OR7A17O14581 309 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 ATP6AP2O75787 350 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 NADKO95544 446 aaPredicted RBP20.8■□□□□ 0.92
C9orf3-213ENST00000471978 ACSL3O95573 720 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 INHBAP08476 426 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 RBP1P09455 135 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 CHRNB4P30926 498 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 PIGAP37287 484 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 PMPCAQ10713 525 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 HYAL4Q2M3T9 481 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 SPRED3Q2MJR0 410 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 MEX3BQ6ZN04 569 aaKnown RBP20.8■□□□□ 0.92
C9orf3-213ENST00000471978 RNF111Q6ZNA4 994 aa20.8■□□□□ 0.92
C9orf3-213ENST00000471978 TRILQ7L0X0 811 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms