RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 RASGEF1CQ8N431 466 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 SLC15A4Q8N697 577 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 NUBPLQ8TB37 319 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 SLC2A12Q8TD20 617 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 RNASE6Q93091 150 aaKnown RBP8.42□□□□□ -1.06
CPSF4-211ENST00000471455 UBE2E3Q969T4 207 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 HSPBAP1Q96EW2 488 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 RUNDC3BQ96NL0 473 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 QRFPRQ96P65 431 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 EFCAB11Q9BUY7 163 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 ALOXE3Q9BYJ1 711 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 LIN28AQ9H9Z2 209 aaKnown RBP8.42□□□□□ -1.06
CPSF4-211ENST00000471455 ZFP64Q9NPA5 681 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 TUBA8Q9NY65 449 aaPredicted RBP8.42□□□□□ -1.06
CPSF4-211ENST00000471455 FRRS1LQ9P0K9 344 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 CTNNAL1Q9UBT7 734 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 PLEKHA6Q9Y2H5 1048 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 JRKLQ9Y4A0 524 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 ATG4BQ9Y4P1 393 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 CTAGE15A4D2H0 777 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 FAM171A2A8MVW0 826 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CYR61O00622 381 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CCL3P10147 92 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 SERPINB1P30740 379 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 SLC6A12P48065 614 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 HNRNPFP52597 415 aaKnown RBP8.41□□□□□ -1.06
CPSF4-211ENST00000471455 SLC12A2P55011 1212 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 PLIN5Q00G26 463 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 FOXO1Q12778 655 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 KEAP1Q14145 624 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 FRG1Q14331 258 aaKnown RBP8.41□□□□□ -1.06
CPSF4-211ENST00000471455 FBXL19-AS1Q494R0 122 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 TMEM35AQ53FP2 167 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CDKL4Q5MAI5 379 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 TEDDM1Q5T9Z0 273 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 ABHD17CQ6PCB6 329 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CTAGE6Q86UF2 777 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CDC20BQ86Y33 519 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 LACC1Q8IV20 430 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 PM20D2Q8IYS1 436 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 TMEM52Q8NDY8 209 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 PTPMT1Q8WUK0 201 aaPredicted RBP8.41□□□□□ -1.06
CPSF4-211ENST00000471455 LRRC39Q96DD0 335 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 SPACA9Q96E40 222 aaPredicted RBP8.41□□□□□ -1.06
CPSF4-211ENST00000471455 PTCD3Q96EY7 689 aaKnown RBP8.41□□□□□ -1.06
CPSF4-211ENST00000471455 PWWP2AQ96N64 755 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 NSUN5Q96P11 429 aaKnown RBP8.41□□□□□ -1.06
CPSF4-211ENST00000471455 DGAT2Q96PD7 388 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CSF3RQ99062 836 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 KRT12Q99456 494 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 PELOQ9BRX2 385 aaKnown RBP8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CENPKQ9BS16 269 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 TBCDQ9BTW9 1192 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 ZNF703Q9H7S9 590 aaPredicted RBP8.41□□□□□ -1.06
CPSF4-211ENST00000471455 POPDC3Q9HBV1 291 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 ACKR4Q9NPB9 350 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 DNAJC11Q9NVH1 559 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 MS4A12Q9NXJ0 267 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 NSMCE4AQ9NXX6 385 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 WWOXQ9NZC7 414 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CRIM1Q9NZV1 1036 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CNIH4Q9P003 139 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 CLDN16Q9Y5I7 305 aa8.41□□□□□ -1.06
CPSF4-211ENST00000471455 NIPBLQ6KC79 2804 aaeCLIP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 C15orf38-AP3S2A0A0A6YYH1 394 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 FAM95CA0A1B0GW59 222 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 TUBAL3A6NHL2 446 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 CAPN14A8MX76 684 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 AHRRA9YTQ3 701 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 CDC7O00311 574 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 DNALI1O14645 258 aaPredicted RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 PROM1O43490 865 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 S100BP04271 92 aaPredicted RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 CELA3AP09093 270 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 BMP5P22003 454 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 SERPINB3P29508 390 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 GCKP35557 465 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 MSH2P43246 934 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 RPL21P46778 160 aaKnown RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 STT3AP46977 705 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 RPP38P78345 283 aaKnown RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 SORDQ00796 357 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 ASPHQ12797 758 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 DAZAP2Q15038 168 aaPredicted RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 TSNQ15631 228 aaKnown RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 PDK4Q16654 411 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 KCTD19Q17RG1 926 aaPredicted RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 AP5B1Q2VPB7 878 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 PIGGQ5H8A4 983 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 SLC29A4Q7RTT9 530 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 LIX1LQ8IVB5 337 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 ULK2Q8IYT8 1036 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 TAGAPQ8N103 731 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 MMP21Q8N119 569 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 LRRC25Q8N386 305 aaPredicted RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 SNX31Q8N9S9 440 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 NEIL3Q8TAT5 605 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 PAQR8Q8TEZ7 354 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 SLCO2A1Q92959 643 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 RHBDF1Q96CC6 855 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms