RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FRG2CA6NGY1 282 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ZFP92A6NM28 416 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CCT8L1PA6NM43 557 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 H0YIG0 161 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 M0R296 226 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CHUKO15111 745 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 GPAA1O43292 621 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 DKC1O60832 514 aaKnown RBP eCLIP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 LYPD3O95274 346 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 APOA4P06727 396 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 P0C879 139 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 SLC35E2P0CK97 266 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 PGAM2P15259 253 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 PRKAR2BP31323 418 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 SOAT1P35610 550 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 GP5P40197 560 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 MTIF2P46199 727 aaKnown RBP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 MFAP2P55001 183 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 RIPK4P57078 832 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 PRKCEQ02156 737 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 PAX2Q02962 417 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CKAP4Q07065 602 aaKnown RBP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 MEF2DQ14814 521 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 EMC2Q15006 297 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 PSMD6Q15008 389 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 KIAA0040Q15053 153 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ISXQ2M1V0 245 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ANKRD55Q3KP44 614 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ACER2Q5QJU3 275 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 AGAP6Q5VW22 663 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CAVIN1Q6NZI2 390 aaKnown RBP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 PODNL1Q6PEZ8 512 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 C2orf66Q6UXQ4 117 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 OTOAQ7RTW8 1153 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ADGRD2Q7Z7M1 963 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 C17orf64Q86WR6 236 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 AQP12AQ8IXF9 295 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 OR8H2Q8N162 312 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 FBXW8Q8N3Y1 598 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 GVQW1Q8N7I0 195 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 UXS1Q8NBZ7 420 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 OR2L5Q8NG80 312 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 OR4F5Q8NH21 305 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 SPATA18Q8TC71 538 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 GANCQ8TET4 914 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 TCP11Q8WWU5 503 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CRYGNQ8WXF5 182 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CORO2AQ92828 525 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 PNPLA2Q96AD5 504 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 SNRNP40Q96DI7 357 aaKnown RBP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 RAB3CQ96E17 227 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF799Q96GE5 643 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 C16orf58Q96GQ5 468 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ERO1AQ96HE7 468 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 GBP5Q96PP8 586 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CCT8L2Q96SF2 557 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 BAG1Q99933 345 aaPredicted RBP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 C17orf62Q9BQA9 187 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF559Q9BR84 538 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ST6GALNAC5Q9BVH7 336 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 AP1M1Q9BXS5 423 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 WWP1Q9H0M0 922 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CXXC4Q9H2H0 198 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 TNMDQ9H2S6 317 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CUEDC2Q9H467 287 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 IL1RL2Q9HB29 575 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ELL3Q9HB65 397 aaPredicted RBP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 TIGARQ9NQ88 270 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 PLSCR3Q9NRY6 295 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 FAM212BQ9NTI7 297 aaPredicted RBP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 SLCO1C1Q9NYB5 712 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 TAS2R16Q9NYV7 291 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 SENP1Q9P0U3 644 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 CFDP1Q9UEE9 299 aaPredicted RBP0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ABCG2Q9UNQ0 655 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 A0A087X0K7 114 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 MAGEB16A2A368 324 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 EFCAB7A8K855 629 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SLC30A4O14863 429 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SYT7O43581 403 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 STAM2O75886 525 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 DUSP14O95147 198 aaKnown RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 PRAMEF12O95522 483 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 HOXC4P09017 264 aaPredicted RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 MMP10P09238 476 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SBK2P0C263 348 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 LAMP1P11279 417 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF32P17041 273 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 BDNFP23560 247 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 KCNJ1P48048 391 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 CCR4P51679 360 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 ARHGDIAP52565 204 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF133P52736 654 aaPredicted RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 STX17P56962 302 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SCN1BQ07699 218 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 KCTD2Q14681 263 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SPHARQ15513 63 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 MICAQ29983 383 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 QRICH1Q2TAL8 776 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 WSCD2Q2TBF2 565 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms