RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 TMEM52Q8NDY8 209 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 FAM13CQ8NE31 585 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 C7orf57Q8NEG2 295 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 OR51Q1Q8NH59 317 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 SFXN5Q8TD22 340 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 NETO1Q8TDF5 533 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 ZFP90Q8TF47 636 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 ANKRD9Q96BM1 317 aaPredicted RBP8.19□□□□□ -1.1
HDLBP-233ENST00000470710 DEPDC7Q96QD5 511 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 KAT8Q9H7Z6 458 aaKnown RBP8.19□□□□□ -1.1
HDLBP-233ENST00000470710 TPT1P8Q9HAU6 139 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 ZNF304Q9HCX3 659 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 SIRT3Q9NTG7 399 aaPredicted RBP8.19□□□□□ -1.1
HDLBP-233ENST00000470710 SUCOQ9UBS9 1254 aaKnown RBP8.19□□□□□ -1.1
HDLBP-233ENST00000470710 NDOR1Q9UHB4 597 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 CORO2BQ9UQ03 480 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 MMACHCQ9Y4U1 282 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 SEC16AO15027 2179 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 ZNF292O60281 2723 aa8.19□□□□□ -1.1
HDLBP-233ENST00000470710 PCNX2A6NKB5 2137 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SYNDIG1LA6NDD5 238 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 EVPLLA8MZ36 301 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CLIC1O00299 241 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 FGF17O60258 216 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CPNE3O75131 537 aaKnown RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CSO75390 466 aaKnown RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 TIAF1O95411 115 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 KRT75O95678 551 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 ATP1B1P05026 303 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 ABCB1P08183 1280 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SLC35E2P0CK97 266 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CCL4P13236 92 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 PORP16435 677 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 GPX2P18283 190 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 RORAP35398 523 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 FEN1P39748 380 aaKnown RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 MAGEA8P43361 318 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 OR1D4P47884 311 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 GSK3BP49841 420 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CDK9P50750 372 aaKnown RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 HSD17B7P56937 341 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 MTPNP58546 118 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 RAB15P59190 212 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 NHLH1Q02575 133 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 LIPEQ05469 1076 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 DUSP2Q05923 314 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 VAC14Q08AM6 782 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 TRAP1Q12931 704 aaKnown RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 BNIP2Q12982 314 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 HSPB3Q12988 150 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 BIKQ13323 160 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 EIF3IQ13347 325 aaKnown RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SELPLGQ14242 412 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 FXNQ16595 210 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SYT16Q17RD7 645 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 ZNF750Q32MQ0 723 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CCDC157Q569K6 752 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 ARHGAP40Q5TG30 622 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 ZNF385CQ66K41 422 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 FAM180BQ6P0A1 224 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CEACAM20Q6UY09 585 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 COX15Q7KZN9 410 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 NET1Q7Z628 596 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CALHM3Q86XJ0 350 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SHISA5Q8N114 240 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 METTL27Q8N6F8 245 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 DEFB124Q8NES8 71 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 COL26A1Q96A83 441 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 MOAP1Q96BY2 351 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CCDC124Q96CT7 223 aaKnown RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 NEURL3Q96EH8 262 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 AURKBQ96GD4 344 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 PEX11GQ96HA9 241 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 MS4A3Q96HJ5 214 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 LRFN5Q96NI6 719 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 KCTD14Q9BQ13 255 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 ECSITQ9BQ95 431 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 ZPBPQ9BS86 351 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SLC35A5Q9BS91 424 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 THUMPD3Q9BV44 507 aaKnown RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SPATA9Q9BWV2 254 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SLC7A5P2Q9GIP4 190 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 TGIF2Q9GZN2 237 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 MUC13Q9H3R2 512 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 RAD21L1Q9H4I0 556 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 IKZF5Q9H5V7 419 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 EPS8L2Q9H6S3 715 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 CXorf36Q9H7Y0 433 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 APMAPQ9HDC9 416 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 MKKSQ9NPJ1 570 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-233ENST00000470710 PRTFDC1Q9NRG1 225 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 LANCL2Q9NS86 450 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SEMA3GQ9NS98 782 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 SLC39A1Q9NY26 324 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 NTMQ9P121 344 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 TRPC4Q9UBN4 977 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 POMPQ9Y244 141 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 LOXL2Q9Y4K0 774 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 MAU2Q9Y6X3 613 aa8.18□□□□□ -1.1
HDLBP-233ENST00000470710 PTPRZ1P23471 2315 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms