RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 EFCAB9A8MZ26 197 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 SLC28A1O00337 649 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 FZD6O60353 706 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 SOCS5O75159 536 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 RASAL1O95294 804 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 CLCN4P51793 760 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 ZNF805Q5CZA5 627 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 Q6ZNB5 142 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 CREB3L2Q70SY1 520 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 ZNF761Q86XN6 746 aaPredicted RBP11.78□□□□□ -0.52
USP11-206ENST00000469080 FRS2Q8WU20 508 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 NEIL2Q969S2 332 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 RSPRY1Q96DX4 576 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 NUS1Q96E22 293 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 TMEM168Q9H0V1 697 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 FBXO10Q9UK96 956 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 PLCL2Q9UPR0 1127 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 GRIP1Q9Y3R0 1128 aa11.78□□□□□ -0.52
USP11-206ENST00000469080 ASPDHA6ND91 283 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 M0R129 80 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 FGF4P08620 206 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.52
USP11-206ENST00000469080 SLC7A9P82251 487 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 ATP6AP1Q15904 470 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 FBXO43Q4G163 708 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 PYCR3Q53H96 274 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 LINC00299Q6ZSB3 139 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 STX12Q86Y82 276 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 RAB8BQ92930 207 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 ARMC5Q96C12 935 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 ROPN1LQ96C74 230 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 ZNF689Q96CS4 500 aaPredicted RBP11.77□□□□□ -0.52
USP11-206ENST00000469080 VWCEQ96DN2 955 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 APOL4Q9BPW4 351 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 C1QTNF6Q9BXI9 259 aa11.77□□□□□ -0.52
USP11-206ENST00000469080 H3BQ06 376 aaPredicted RBP11.77□□□□□ -0.53
USP11-206ENST00000469080 XPNPEP2O43895 674 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 CDK1P06493 297 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 RAB3AP20336 220 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 CSTF2P33240 577 aaKnown RBP eCLIP11.77□□□□□ -0.537e-9■■■■■ 33.2
USP11-206ENST00000469080 FLYWCH1Q4VC44 716 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 CCNJQ5T5M9 372 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 NOXRED1Q6NXP6 359 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 FBXO46Q6PJ61 603 aaPredicted RBP11.77□□□□□ -0.53
USP11-206ENST00000469080 OR4A15Q8NGL6 344 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 NETO1Q8TDF5 533 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 RC3H2Q9HBD1 1191 aaKnown RBP11.77□□□□□ -0.53
USP11-206ENST00000469080 NDRG2Q9UN36 371 aaKnown RBP11.77□□□□□ -0.53
USP11-206ENST00000469080 LOC100506127A0A0U1RQW1 187 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 G3V2T6 193 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 CLIC1O00299 241 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 EMX2Q04743 252 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 DPY19L1Q2PZI1 675 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 HDDC2Q7Z4H3 204 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 C10orf111Q8N326 155 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 PKP4Q99569 1192 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 PBX4Q9BYU1 374 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 VPS29Q9UBQ0 182 aa11.77□□□□□ -0.53
USP11-206ENST00000469080 UNC13CQ8NB66 2214 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 LINC01565O15544 149 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 GZMKP49863 264 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 CLDN2P57739 230 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 TBPL1P62380 186 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 RCAN2Q14206 197 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 SYT16Q17RD7 645 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 CPTPQ5TA50 214 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ZFAND4Q86XD8 727 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 MEX3DQ86XN8 651 aaKnown RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 TRPV3Q8NET8 790 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 NANPQ8TBE9 248 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ARSGQ96EG1 525 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 C12orf66Q96MD2 445 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 MMP27Q9H306 513 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 CLDND1Q9NY35 253 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 SAMHD1Q9Y3Z3 626 aaKnown RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 PTPRDP23468 1912 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 TRBV23-1A0A0A0MS06 115 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 PNMA8CA0A1B0GUJ8 204 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 PIPSLA2A3N6 862 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 BBIP1A8MTZ0 92 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ISM1B1AKI9 464 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 SGCEO43556 437 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 OR1F1O43749 312 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 FADS2O95864 444 aaKnown RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 ZNF806P0C7X5 589 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ACPPP15309 386 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 FMO3P31513 532 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 UGT2B10P36537 528 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 MAPK9P45984 424 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 PXNP49023 591 aaPredicted RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 TAS2R50P59544 299 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 RAB8AP61006 207 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 RAB14P61106 215 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 RGS1Q08116 209 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 GPR50Q13585 617 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ZNF273Q14593 569 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 C6orf141Q5SZD1 244 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ZBTB37Q5TC79 503 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 HIST2H2AA3Q6FI13 130 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms