RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 FAM86B1Q8N7N1 296 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 TTC29Q8NA56 475 aaPredicted RBP17.89■□□□□ 0.45
SMC4-209ENST00000468653 SLC47A1Q96FL8 570 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 MAGED4Q96JG8 741 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 ZNF681Q96N22 645 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 ZNF184Q99676 751 aaPredicted RBP17.89■□□□□ 0.45
SMC4-209ENST00000468653 TMEM38AQ9H6F2 299 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 YY1AP1Q9H869 796 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 OLAHQ9NV23 265 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 TMEM9Q9P0T7 183 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 SAMD4AQ9UPU9 718 aaKnown RBP17.89■□□□□ 0.45
SMC4-209ENST00000468653 DTNAQ9Y4J8 743 aa17.89■□□□□ 0.45
SMC4-209ENST00000468653 MN1Q10571 1320 aaPredicted RBP17.88■□□□□ 0.45
SMC4-209ENST00000468653 A0A0A6YYC8 382 aaPredicted RBP17.88■□□□□ 0.45
SMC4-209ENST00000468653 HYKKA2RU49 373 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 I3L1I5 382 aaPredicted RBP17.88■□□□□ 0.45
SMC4-209ENST00000468653 RDH16O75452 317 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 ZNF682O95780 498 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 MT-ND1P03886 318 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 SYPP08247 313 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 XKP51811 444 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 DSTNP60981 165 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 DUSP2Q05923 314 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 KCNAB1Q14722 419 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 CEBPEQ15744 281 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 NIPAL1Q6NVV3 410 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 GUSBP11Q6P575 273 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 EME1Q96AY2 570 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 AGPAT4Q9NRZ5 378 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 ZCCHC3Q9NUD5 404 aaKnown RBP17.88■□□□□ 0.45
SMC4-209ENST00000468653 RPS6KA6Q9UK32 745 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 PCDH15Q96QU1 1955 aa17.88■□□□□ 0.45
SMC4-209ENST00000468653 A8MU76 341 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 PTGER1P34995 402 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 RAB38P57729 211 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 RPS26P62854 115 aaKnown RBP17.87■□□□□ 0.45
SMC4-209ENST00000468653 SCARB2Q14108 478 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 ZNF630Q2M218 657 aaPredicted RBP17.87■□□□□ 0.45
SMC4-209ENST00000468653 GARNL3Q5VVW2 1013 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 TNFAIP8L2Q6P589 184 aaPredicted RBP17.87■□□□□ 0.45
SMC4-209ENST00000468653 BHLHB9Q6PI77 547 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 CEACAM20Q6UY09 585 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 TMEM64Q6YI46 380 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 ZC3H7AQ8IWR0 971 aaKnown RBP17.87■□□□□ 0.45
SMC4-209ENST00000468653 OR4N5Q8IXE1 308 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 LRRC25Q8N386 305 aaPredicted RBP17.87■□□□□ 0.45
SMC4-209ENST00000468653 FAM181AQ8N9Y4 354 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 ICA1LQ8NDH6 482 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 NFKBIDQ8NI38 313 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 PYURFQ96I23 114 aa17.87■□□□□ 0.45
SMC4-209ENST00000468653 GTPBP2Q9BX10 602 aaKnown RBP17.87■□□□□ 0.45
SMC4-209ENST00000468653 SPRTNQ9H040 489 aaPredicted RBP17.87■□□□□ 0.45
SMC4-209ENST00000468653 FAM149AA5PLN7 773 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 CYR61O00622 381 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 CHST10O43529 356 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 B4GALT2O60909 372 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 BMP2P12643 396 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 PRKAG1P54619 331 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 FAM53BQ14153 422 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 GRM7Q14831 915 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 WLSQ5T9L3 541 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 INTS11Q5TA45 600 aaKnown RBP17.86■□□□□ 0.45
SMC4-209ENST00000468653 PRSS42Q7Z5A4 293 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 GALNT10Q86SR1 603 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 HORMAD2Q8N7B1 307 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 OR9A2Q8NGT5 310 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 SFXN5Q8TD22 340 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 COL26A1Q96A83 441 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 MOAP1Q96BY2 351 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 CENPNQ96H22 339 aaPredicted RBP17.86■□□□□ 0.45
SMC4-209ENST00000468653 SLC35G5Q96KT7 338 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 NUDT22Q9BRQ3 303 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 MAGIXQ9H6Y5 334 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 C3orf14Q9HBI5 128 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 LY6G6EA0A0G2JKS1 128 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 FAM227AF5H4B4 570 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 LDLRP01130 860 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 HOXB6P17509 224 aaKnown RBP17.86■□□□□ 0.45
SMC4-209ENST00000468653 AQP1P29972 269 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 CDK6Q00534 326 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 ATP6AP1Q15904 470 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 SFT2D3Q587I9 215 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 PERM1Q5SV97 790 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 TMTC4Q5T4D3 741 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 TMEM107Q6UX40 140 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 KMT5CQ86Y97 462 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 ANKFN1Q8N957 763 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 TANKQ92844 425 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 VCXQ9H320 206 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 SEMA5BQ9P283 1151 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 U3KQA8 63 aa17.86■□□□□ 0.45
SMC4-209ENST00000468653 ASXL3Q9C0F0 2248 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 ADAMTS9Q9P2N4 1935 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 EME2A4GXA9 379 aaPredicted RBP17.85■□□□□ 0.45
SMC4-209ENST00000468653 TMEM150CB9EJG8 249 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 EMC8O43402 210 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 FOXS1O43638 330 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 OR2B3O76000 313 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 MED26O95402 600 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 CAPNS1P04632 268 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms