RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 USP9XQ93008 2570 aaPredicted RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 LRRK2Q5S007 2527 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 IGHV1-45A0A0A0MS14 117 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 NSG1A0A0A6YYJ2 146 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MKRN2OSH3BPM6 223 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 HDAC3O15379 428 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 NKX2-8O15522 239 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 TMPRSS11DO60235 418 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PCDH7O60245 1069 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PRMT3O60678 531 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ALOX12BO75342 701 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 EEDO75530 441 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 LYPLA1O75608 230 aaPredicted RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MYO1DO94832 1006 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 HSPA4LO95757 839 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 GPR75O95800 540 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ATP1B1P05026 303 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SERPINA7P05543 415 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 HEXBP07686 556 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 FAM58BPP0C7Q3 252 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PRR35P0CG20 571 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SLC35E2P0CK97 266 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PRPS2P11908 318 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 COX6A1P12074 109 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 COX7A2P14406 83 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ALOX15P16050 662 aaPredicted RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 TSPAN8P19075 237 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 WT1P19544 449 aaPredicted RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 DDCP20711 480 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PRPS1L1P21108 318 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CPN2P22792 545 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CERS1P27544 350 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ITPKBP27987 946 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 GRNP28799 593 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ARRB2P32121 409 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 RPL3P39023 403 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CCR10P46092 362 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ASMTP46597 345 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 STT3AP46977 705 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SLC1A6P48664 564 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MRPL19P49406 292 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 FOXA1P55317 472 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CXADRP78310 365 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MAT1AQ00266 395 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PLIN5Q00G26 463 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 EMX2Q04743 252 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 BST1Q10588 318 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 STX3Q13277 289 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SLAMF1Q13291 335 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 DDX39BQ13838 428 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 RUNX2Q13950 521 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ERV3-1Q14264 604 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MYBPC3Q14896 1274 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PCOLCEQ15113 449 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 NSDHLQ15738 373 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 IMPG1Q17R60 797 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SPRED3Q2MJR0 410 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 DPY19L1Q2PZI1 675 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MINDY4Q4G0A6 757 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ATP6AP1LQ52LC2 224 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 VWA2Q5GFL6 755 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SH2D4BQ5SQS7 431 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CCNYL2Q5T2Q4 361 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 NDUFAF5Q5TEU4 345 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 VWA5B1Q5TIE3 1220 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 IRAK1BP1Q5VVH5 260 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MLIPQ5VWP3 458 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CLEC6AQ6EIG7 209 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 H3F3CQ6NXT2 135 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SLC48A1Q6P1K1 146 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CYP20A1Q6UW02 462 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 IGFL2Q6UWQ7 119 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 Q6ZSR9 355 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 RPS27LQ71UM5 84 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CPEB2Q7Z5Q1 589 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CAMKMTQ7Z624 323 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 BTLAQ7Z6A9 289 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ANKRD37Q7Z713 158 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CLNKQ7Z7G1 428 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 VASH2Q86V25 355 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 KBTBD2Q8IY47 623 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ST13P4Q8IZP2 240 aaPredicted RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 C1orf52Q8N6N3 182 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ANKRD42Q8N9B4 389 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MORN4Q8NDC4 146 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 C17orf47Q8NEP4 570 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 OR5T3Q8NGG3 340 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 OR14A16Q8NHC5 309 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 DNAJB14Q8TBM8 379 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 M1APQ8TC57 530 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PIWIL2Q8TC59 973 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 TWIST2Q8WVJ9 160 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CKAP2Q8WWK9 683 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 TM9SF4Q92544 642 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 DAZLQ92904 295 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 C19orf60Q96EN9 201 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PEX11GQ96HA9 241 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 NAF1Q96HR8 494 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 HSH2DQ96JZ2 352 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms