RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TSC22D4Q9Y3Q8 395 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 ANGPTL3Q9Y5C1 460 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 A0A087X1B8 175 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 GLOD5A6NK44 160 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 PROM1O43490 865 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 TMPRSS11DO60235 418 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 SIX3O95343 332 aaPredicted RBP22.6■■□□□ 1.21
PTCH1-210ENST00000468211 GFAPP14136 432 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 COX7A2P14406 83 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 IGFBP2P18065 325 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 CHRNB4P30926 498 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 BSGP35613 385 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 TLE4Q04727 773 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 LIPJQ5W064 366 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 MRM1Q6IN84 353 aaKnown RBP22.6■■□□□ 1.21
PTCH1-210ENST00000468211 TRILQ7L0X0 811 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 ZNF572Q7Z3I7 529 aaPredicted RBP22.6■■□□□ 1.21
PTCH1-210ENST00000468211 FAM109AQ8N4B1 249 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 NUBPLQ8TB37 319 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 ASB5Q8WWX0 329 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 TANKQ92844 425 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 RBM18Q96H35 190 aaKnown RBP22.6■■□□□ 1.21
PTCH1-210ENST00000468211 SMC6Q96SB8 1091 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 ACTR8Q9H981 624 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 SH2D2AQ9NP31 389 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 MS4A12Q9NXJ0 267 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 ITGB1BP2Q9UKP3 347 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 RNF11Q9Y3C5 154 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 ASB4Q9Y574 426 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 PCDHGA11Q9Y5H2 935 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.6■■□□□ 1.21
PTCH1-210ENST00000468211 HIVEP1P15822 2718 aa22.6■■□□□ 1.21
PTCH1-210ENST00000468211 ARHGAP21Q5T5U3 1957 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 A0A096LPK6 155 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 A0A0A6YYD5 115 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 ATP6AP2A0A1C7CYW4 349 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 A0A1W2PR48 441 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 SYCE1LA8MT33 242 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 ATP6AP2O75787 350 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 TOXO94900 526 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 ALDOAP04075 364 aaKnown RBP22.59■■□□□ 1.21
PTCH1-210ENST00000468211 P04436 131 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 ALOX15P16050 662 aaPredicted RBP22.59■■□□□ 1.21
PTCH1-210ENST00000468211 NEK2P51955 445 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 ALDH18A1P54886 795 aaKnown RBP22.59■■□□□ 1.21
PTCH1-210ENST00000468211 GTF2H2Q13888 395 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 PCBP2Q15366 365 aaKnown RBP eCLIP22.59■■□□□ 1.21
PTCH1-210ENST00000468211 CPSF6Q16630 551 aaKnown RBP eCLIP22.59■■□□□ 1.21
PTCH1-210ENST00000468211 FAM83EQ2M2I3 478 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 HYAL4Q2M3T9 481 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 GTF2H2CQ6P1K8 395 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 GOLGA7Q7Z5G4 137 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 PLD6Q8N2A8 252 aaKnown RBP22.59■■□□□ 1.21
PTCH1-210ENST00000468211 OR5M3Q8NGP4 307 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 FBXL20Q96IG2 436 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 PHF11Q9UIL8 331 aa22.59■■□□□ 1.21
PTCH1-210ENST00000468211 A0A1B0GVC2 190 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 A0A1W2PS29 197 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 H0YIV9 168 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 KLHL2O95198 593 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 PTX3P26022 381 aaPredicted RBP22.58■■□□□ 1.21
PTCH1-210ENST00000468211 PIK3CGP48736 1102 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 HERVK_113P63132 956 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 ERVK-8P63133 956 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 PLIN5Q00G26 463 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 ACAP2Q15057 778 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 UAP1Q16222 522 aaPredicted RBP22.58■■□□□ 1.21
PTCH1-210ENST00000468211 RTL6Q6ICC9 239 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 ZNF585AQ6P3V2 769 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 WDR20Q8TBZ3 569 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 CHTF18Q8WVB6 975 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 LRRC1Q9BTT6 524 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 ERVK-6Q9BXR3 956 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 IPPKQ9H8X2 491 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 PROK2Q9HC23 129 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 ZNF358Q9NW07 568 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 CPSF2Q9P2I0 782 aaKnown RBP22.58■■□□□ 1.21
PTCH1-210ENST00000468211 ERVK-19Q9WJR5 959 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 FAM215AQ9Y5M1 114 aa22.58■■□□□ 1.21
PTCH1-210ENST00000468211 GPR75O95800 540 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 GBAP04062 536 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 CLPSP04118 112 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 RFPL3SP0C7P2 107 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 ACVR2AP27037 513 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 ST13P4Q8IZP2 240 aaPredicted RBP22.57■■□□□ 1.2
PTCH1-210ENST00000468211 SPACA9Q96E40 222 aaPredicted RBP22.57■■□□□ 1.2
PTCH1-210ENST00000468211 CDK15Q96Q40 435 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 CENPKQ9BS16 269 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 CNPPD1Q9BV87 410 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 DDX31Q9H8H2 851 aaKnown RBP22.57■■□□□ 1.2
PTCH1-210ENST00000468211 MCCC2Q9HCC0 563 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.57■■□□□ 1.2
PTCH1-210ENST00000468211 EXPH5Q8NEV8 1989 aa22.57■■□□□ 1.2
PTCH1-210ENST00000468211 OR14I1A6ND48 311 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 AIFM1O95831 613 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 FAM58BPP0C7Q3 252 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 ENDOUP21128 410 aaKnown RBP22.56■■□□□ 1.2
PTCH1-210ENST00000468211 TLX1P31314 330 aaPredicted RBP22.56■■□□□ 1.2
PTCH1-210ENST00000468211 ARFIP1P53367 373 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 BIKQ13323 160 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms