RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TTC29Q8NA56 475 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 DRAXINQ8NBI3 349 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 TBC1D15Q8TC07 691 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 UTP15Q8TED0 518 aaKnown RBP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 FAM222BQ8WU58 562 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 TFGQ92734 400 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 SLC22A18Q96BI1 424 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 TADA1Q96BN2 335 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 IMP4Q96G21 291 aaKnown RBP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 CFAP36Q96G28 342 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 SNX22Q96L94 193 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 ZNF285Q96NJ3 590 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 C19orf43Q9BQ61 176 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 UTP23Q9BRU9 249 aaKnown RBP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 THAP2Q9H0W7 228 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 OR52A5Q9H2C5 316 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 ZNF703Q9H7S9 590 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 VPS37BQ9H9H4 285 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 GPR35Q9HC97 309 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 ZNF304Q9HCX3 659 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 SAMSN1Q9NSI8 373 aaKnown RBP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 CUTCQ9NTM9 273 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTCD3-207ENST00000467273 FAM30AQ9NZY2 134 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 LRFN1Q9P244 771 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 AASSQ9UDR5 926 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 ALG6Q9Y672 507 aa5.09□□□□□ -1.59
PTCD3-207ENST00000467273 PHF3Q92576 2039 aaKnown RBP5.09□□□□□ -1.6
PTCD3-207ENST00000467273 B9A039 149 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 H0YC42 278 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MFSD11O43934 449 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 CRLF1O75462 422 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 WISP2O76076 250 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 NUDT3O95989 172 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 F10P00742 488 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 EPOP01588 193 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 POLBP06746 335 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 GRPP07492 148 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 SP1P08047 785 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 CHRM5P08912 532 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ITGAMP11215 1152 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 HK1P19367 917 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 FBLP22087 321 aaKnown RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ATP5F1P24539 256 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ATP5DP30049 168 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 AKT1P31749 480 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MAGEA8P43361 318 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 EMP2P54851 167 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 UCP3P55916 312 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ARL4CP56559 192 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 IFI35P80217 286 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 DAZAP2Q15038 168 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 OASLQ15646 514 aaKnown RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ELAVL1Q15717 326 aaKnown RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MEP1AQ16819 746 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 TPD52L1Q16890 204 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MPEG1Q2M385 716 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 SLC25A35Q3KQZ1 300 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ACER2Q5QJU3 275 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ZNF362Q5T0B9 420 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 PLAG1Q6DJT9 500 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 TMEM205Q6UW68 189 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 C3P1Q6ZMU1 363 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 SHISA6Q6ZSJ9 500 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 CCDC91Q7Z6B0 441 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 NT5DC3Q86UY8 548 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 GLCCI1Q86VQ1 547 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 PHC2Q8IXK0 858 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 CFAP206Q8IYR0 622 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MPP5Q8N3R9 675 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MARVELD2Q8N4S9 558 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 SLC15A4Q8N697 577 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 FITM2Q8N6M3 262 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 IPMKQ8NFU5 416 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 OR56A3Q8NH54 315 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 FLVCR1-AS1Q8TAF5 88 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 FAM71BQ8TC56 605 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ST8SIA2Q92186 375 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 C8orf44Q96CB5 159 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 LRRC46Q96FV0 321 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 IMMP1LQ96LU5 166 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 SLC39A3Q9BRY0 314 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 TMEM120AQ9BXJ8 343 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 UCK2Q9BZX2 261 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 TINAGL1Q9GZM7 467 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 SLC25A51Q9H1U9 297 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 GANQ9H2C0 597 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 COG4Q9H9E3 785 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MSL2Q9HCI7 577 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MRPL47Q9HD33 250 aaKnown RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 MRPS18AQ9NVS2 196 aaKnown RBP5.08□□□□□ -1.6
PTCD3-207ENST00000467273 GNPTGQ9UJJ9 305 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 SLC13A4Q9UKG4 626 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ADAM21Q9UKJ8 722 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 CDC14AQ9UNH5 594 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 ICKQ9UPZ9 632 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 PKP3Q9Y446 797 aa5.08□□□□□ -1.6
PTCD3-207ENST00000467273 A0A087WWL8 130 aa5.07□□□□□ -1.6
PTCD3-207ENST00000467273 AGAP14A8MT82 685 aa5.07□□□□□ -1.6
PTCD3-207ENST00000467273 TARM1B6A8C7 271 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms