RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 BBOF1Q8ND07 529 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 C7orf57Q8NEG2 295 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 SMPDL3BQ92485 455 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 MAGOHBQ96A72 148 aaKnown RBP11.17□□□□□ -0.62
UBR4-211ENST00000467272 FBXL20Q96IG2 436 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 DACH2Q96NX9 599 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 KCNC2Q96PR1 638 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 PIP5K1AQ99755 562 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 NAT9Q9BTE0 207 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 TBCDQ9BTW9 1192 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 CALHM2Q9HA72 323 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 PSAT1Q9Y617 370 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 KIAA1549Q9HCM3 1950 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 H2AFYO75367 372 aaKnown RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 WDR47O94967 919 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 HIST1H1TP22492 207 aaPredicted RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 CTSSP25774 331 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 CDC25BP30305 580 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 HPDP32754 393 aaPredicted RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 OPRM1P35372 400 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 SOX18P35713 384 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 TRPC1P48995 793 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 CDK9P50750 372 aaKnown RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 SLC37A1P57057 533 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 KCNJ2P63252 427 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 ID2Q02363 134 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 DOC2AQ14183 400 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 PCBP2Q15366 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
UBR4-211ENST00000467272 TSNQ15631 228 aaKnown RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 TBCCQ15814 346 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 SPRED3Q2MJR0 410 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 CDKL4Q5MAI5 379 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 DCST1Q5T197 706 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 CCDC137Q6PK04 289 aaKnown RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 PRSS57Q6UWY2 283 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 ZC3HC1Q86WB0 502 aaKnown RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 NKAPQ8N5F7 415 aaKnown RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 SLC22A8Q8TCC7 542 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 ZNF473Q8WTR7 871 aaKnown RBP11.16□□□□□ -0.62
UBR4-211ENST00000467272 LRRC46Q96FV0 321 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 WDYHV1Q96HA8 205 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 UCN2Q96RP3 112 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 CAPS2Q9BXY5 557 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 MS4A8Q9BY19 250 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 ROGDIQ9GZN7 287 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 COPS7AQ9UBW8 275 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 FETUBQ9UGM5 382 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 ADAM21Q9UKJ8 722 aa11.16□□□□□ -0.62
UBR4-211ENST00000467272 PABPN1LA6NDY0 278 aaKnown RBP11.15□□□□□ -0.62
UBR4-211ENST00000467272 ANKDD1BA6NHY2 528 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 SIAH2O43255 324 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 IL2RAP01589 272 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 BMP7P18075 431 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 TNNI3P19429 210 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 SERPINB3P29508 390 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 SLCO1A2P46721 670 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 PCYT1AP49585 367 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 TAS2R39P59534 338 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 BIKQ13323 160 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 ZNF460Q14592 562 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 EBPQ15125 230 aaKnown RBP11.15□□□□□ -0.62
UBR4-211ENST00000467272 TGFBIQ15582 683 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 CXXC5Q7LFL8 322 aaKnown RBP11.15□□□□□ -0.62
UBR4-211ENST00000467272 ADAMTSL2Q86TH1 951 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 PM20D2Q8IYS1 436 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 C9orf106Q8NAJ2 232 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 TRIM58Q8NG06 486 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 GABPB2Q8TAK5 448 aaPredicted RBP11.15□□□□□ -0.62
UBR4-211ENST00000467272 IGFBPL1Q8WX77 278 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 PPWD1Q96BP3 646 aaKnown RBP11.15□□□□□ -0.62
UBR4-211ENST00000467272 HSPBAP1Q96EW2 488 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 PTCD3Q96EY7 689 aaKnown RBP11.15□□□□□ -0.62
UBR4-211ENST00000467272 MS4A14Q96JA4 679 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 UGT2B28Q9BY64 529 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 ANGPTL4Q9BY76 406 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 WWTR1Q9GZV5 400 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 EPB41L4BQ9H329 900 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 EXO5Q9H790 373 aa11.15□□□□□ -0.62
UBR4-211ENST00000467272 SONP18583 2426 aaKnown RBP11.15□□□□□ -0.63
UBR4-211ENST00000467272 C15orf38-AP3S2A0A0A6YYH1 394 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 RTCAO00442 366 aaKnown RBP11.14□□□□□ -0.63
UBR4-211ENST00000467272 TP73O15350 636 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 GALNSP34059 522 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 FNTAP49354 379 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 FOXF2Q12947 444 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 CBLBQ13191 982 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 TMEM35AQ53FP2 167 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 TBCELQ5QJ74 424 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 BICRALQ6AI39 1079 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 CAPN12Q6ZSI9 719 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 SYDE1Q6ZW31 735 aaPredicted RBP11.14□□□□□ -0.63
UBR4-211ENST00000467272 OR4N5Q8IXE1 308 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 LAS2Q8IYD9 372 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 SRFBP1Q8NEF9 429 aaKnown RBP11.14□□□□□ -0.63
UBR4-211ENST00000467272 ZPLD1Q8TCW7 415 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 NUDT8Q8WV74 236 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 CCT6BQ92526 530 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 ISL2Q96A47 359 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 MARK4Q96L34 752 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 SECISBP2Q96T21 854 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms