RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 C1SP09871 688 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 ERVK-21P61565 698 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 SNRPD1P62314 119 aaKnown RBP17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 DDX39BQ13838 428 aaKnown RBP17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 TTLL9Q3SXZ7 439 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 GPR33Q49SQ1 333 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 SLC39A5Q6ZMH5 540 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 HTR3DQ70Z44 454 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 FAM124AQ86V42 546 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 CALHM3Q86XJ0 350 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 PM20D2Q8IYS1 436 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 PGBD3Q8N328 593 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 LILRA3Q8N6C8 439 aaPredicted RBP17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 LRRC17Q8N6Y2 441 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 LMNTD1Q8N9Z9 388 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 FANK1Q8TC84 345 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 TAPBPLQ9BX59 468 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 AGRPO00253 132 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 PCDH17O14917 1159 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 HLA-DQB1P01920 261 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 POLR2GP62487 172 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 DMC1Q14565 340 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 SSX1Q16384 188 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 C22orf39Q6P5X5 142 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 TFAP2EQ6VUC0 442 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 EIF3MQ7L2H7 374 aaKnown RBP17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 DENND6BQ8NEG7 585 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 USP7Q93009 1102 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 PHF21AQ96BD5 680 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 DPCDQ9BVM2 203 aaPredicted RBP17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 SLC32A1Q9H598 525 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 FOLH1BQ9HBA9 442 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 KCTD5Q9NXV2 234 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 PPT2Q9UMR5 302 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 SESN1Q9Y6P5 492 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 ZNF670-ZNF695F2Z2N8 137 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 PER2O15055 1255 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 CCNDBP1O95273 360 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 LRG1P02750 347 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 NUP62P37198 522 aaPredicted RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 RPS14P62263 151 aaKnown RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 RPA4Q13156 261 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 FGFBP1Q14512 234 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 DDI2Q5TDH0 399 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 ADNP2Q6IQ32 1131 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 Q6ZVL8 140 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 USP45Q70EL2 814 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 ZNF551Q7Z340 670 aaPredicted RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 GLCCI1Q86VQ1 547 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 UPRTQ96BW1 309 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 MSLNLQ96KJ4 702 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 KCNC2Q96PR1 638 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 MIXL1Q9H2W2 232 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 THUMPD1Q9NXG2 353 aaKnown RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 SEC14L4Q9UDX3 406 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 HCFC2Q9Y5Z7 792 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 A0A1W2PQL4 384 aaPredicted RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 INMT-MINDY4F8WBC2 141 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 H3BM21 787 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 LYRM1O43325 122 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 LATS1O95835 1130 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 C8AP07357 584 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 SLC2A2P11168 524 aaPredicted RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 CSF2RAP15509 400 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 PSMA1P25786 263 aaKnown RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 BLVRAP53004 296 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 BICRALQ6AI39 1079 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 HSDL2Q6YN16 418 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 FAM217AQ8IXS0 508 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 KCT2Q8NC54 265 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 CYB5D2Q8WUJ1 264 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 MTERF3Q96E29 417 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 MTERF1Q99551 399 aaKnown RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 MCOLN1Q9GZU1 580 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 SERHLQ9NQF3 203 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 RAD18Q9NS91 495 aa17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 NDRG2Q9UN36 371 aaKnown RBP17.2■□□□□ 0.34
SNAPC3-205ENST00000467062 TUBAL3A6NHL2 446 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 DIRAS1O95057 198 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 LGI1O95970 557 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 C9P02748 559 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 IL6P05231 212 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 ALDH9A1P49189 494 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 ABATP80404 500 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 ABRQ12979 859 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 DDX53Q86TM3 631 aaKnown RBP17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 ZNF689Q96CS4 500 aaPredicted RBP17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 LDAHQ9H6V9 325 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 TRPS1Q9UHF7 1281 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 RAB23Q9ULC3 237 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 PCDHGB7Q9Y5F8 929 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 AGAP14A8MT82 685 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 HIST1H2AGP0C0S8 130 aaPredicted RBP17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 FAM157BP0CG42 384 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 HIST1H2ADP20671 130 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 AOAHP28039 575 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 PXNP49023 591 aaPredicted RBP17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 MAN2A2P49641 1150 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 AP1S2P56377 157 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 FLI1Q01543 452 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms