RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 PRICKLE1Q96MT3 831 aaPredicted RBP3.3□□□□□ -1.88
CALD1-214ENST00000466704 NDNQ99608 321 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 BAG1Q99933 345 aaPredicted RBP3.3□□□□□ -1.88
CALD1-214ENST00000466704 PYGO2Q9BRQ0 406 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 ZNF577Q9BSK1 485 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 MTG1Q9BT17 334 aaPredicted RBP3.3□□□□□ -1.88
CALD1-214ENST00000466704 PRO3102Q9H379 93 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 MTHFD2LQ9H903 347 aaPredicted RBP3.3□□□□□ -1.88
CALD1-214ENST00000466704 TBC1D13Q9NVG8 400 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 MUTYHQ9UIF7 546 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 ANAPC5Q9UJX4 755 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 WIPI2Q9Y4P8 454 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 PTPRFP10586 1907 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 RLFQ13129 1914 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 ALPK3Q96L96 1907 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 ZNF236Q9UL36 1845 aa3.3□□□□□ -1.88
CALD1-214ENST00000466704 MUC3AQ02505 3323 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 GRIN2DO15399 1336 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 NFASCO94856 1347 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 MROH7Q68CQ1 1323 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 CACNA1BQ00975 2339 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 VPS37CA5D8V6 355 aaPredicted RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 ANXA2P2A6NMY6 339 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 F8VVB4 439 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 F8VWA3 439 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 PI4K2BG5E9Z4 385 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 H3BQV1 296 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 DDX39AO00148 427 aaKnown RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 TFECO14948 347 aaPredicted RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 SURF4O15260 269 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 MSH4O15457 936 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 SLC37A4O43826 429 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 NEMFO60524 1076 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 CYTIPO60759 359 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 CEACAM4O75871 244 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 LGALS2P05162 132 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 SUPT20HL2P0C7V6 817 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 ZNF286BP0CG31 522 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 F3P13726 295 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 GCFC2P16383 781 aaKnown RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 U2AF2P26368 475 aaKnown RBP eCLIP3.29□□□□□ -1.88
CALD1-214ENST00000466704 PDHA2P29803 388 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 TCF7P36402 384 aaPredicted RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 SULT2A1Q06520 285 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 ITGB3BPQ13352 177 aaPredicted RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 ZNF273Q14593 569 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 FAM189A2Q15884 450 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 UGCGQ16739 394 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 FAM174BQ3ZCQ3 159 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 GLIPR1L2Q4G1C9 344 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 OR4C11Q6IEV9 310 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 FUT10Q6P4F1 479 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 MOXD1Q6UVY6 613 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 LCLAT1Q6UWP7 414 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 ANKRD33Q7Z3H0 272 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 PIGWQ7Z7B1 504 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 CCDC60Q8IWA6 550 aaPredicted RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 SNX21Q969T3 373 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 CNRIP1Q96F85 164 aaPredicted RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 SIPA1Q96FS4 1042 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 ATXN7L3BQ96GX2 97 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 MBOAT7Q96N66 472 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 RAB3IPQ96QF0 476 aaPredicted RBP3.29□□□□□ -1.88
CALD1-214ENST00000466704 SERINC2Q96SA4 455 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 RIT2Q99578 217 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 TEKT3Q9BXF9 490 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 AP1M1Q9BXS5 423 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 AZI2Q9H6S1 392 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 SLC12A6Q9UHW9 1150 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 SMAD5-AS1Q9Y6J3 95 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 COLEC10Q9Y6Z7 277 aa3.29□□□□□ -1.88
CALD1-214ENST00000466704 GSTTP1A0A1W2PQM5 241 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 CCDC188H7C350 402 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 HAS3O00219 553 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 CHMP2AO43633 222 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 PI15O43692 258 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 PGLSO95336 258 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 CCNE2O96020 404 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 YES1P07947 543 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 SMIM10L2AP0DMW4 78 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 SMIM10L2BP0DMW5 78 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 SPP1P10451 314 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 TCF4P15884 667 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 ACADSP16219 412 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 PDGFRAP16234 1089 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 SYT1P21579 422 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 SHC1P29353 583 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 RBMS1P29558 406 aaKnown RBP3.28□□□□□ -1.88
CALD1-214ENST00000466704 SLC26A2P50443 739 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 ZNF41P51814 821 aaPredicted RBP3.28□□□□□ -1.88
CALD1-214ENST00000466704 MFAP3P55082 362 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 CLDN17P56750 224 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 SRSF9Q13242 221 aaKnown RBP eCLIP3.28□□□□□ -1.88
CALD1-214ENST00000466704 TRA2AQ13595 282 aaKnown RBP eCLIP3.28□□□□□ -1.887e-6■■■■□ 25.8
CALD1-214ENST00000466704 C6orf136Q5SQH8 315 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 PRSS55Q6UWB4 352 aaPredicted RBP3.28□□□□□ -1.88
CALD1-214ENST00000466704 MIER3Q7Z3K6 550 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 SPATA21Q7Z572 469 aa3.28□□□□□ -1.88
CALD1-214ENST00000466704 DNAJB7Q7Z6W7 309 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms