RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SFT2D3Q587I9 215 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 NDUFAF7Q7L592 441 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 TICAM1Q8IUC6 712 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 OR4N5Q8IXE1 308 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 RIMKLAQ8IXN7 391 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 TMEM102Q8N9M5 508 aaPredicted RBP14.98□□□□□ -0.01
GPC1-207ENST00000466624 CLHC1Q8NHS4 586 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 C8orf44Q96CB5 159 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 KLHL29Q96CT2 875 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 FER1L6-AS2Q96M78 137 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 WDR77Q9BQA1 342 aaPredicted RBP14.98□□□□□ -0.01
GPC1-207ENST00000466624 NSRP1Q9H0G5 558 aaKnown RBP14.98□□□□□ -0.01
GPC1-207ENST00000466624 CPNE5Q9HCH3 593 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 GIMAP4Q9NUV9 329 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 DCTN4Q9UJW0 460 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 GPR45Q9Y5Y3 372 aa14.98□□□□□ -0.01
GPC1-207ENST00000466624 NSG1A0A0A6YYJ2 146 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 GMNCA6NCL1 334 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 SAGE2PA6NJ88 616 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 WASHC1A8K0Z3 465 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 ANKRD28O15084 1053 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 ERAL1O75616 437 aaKnown RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 PRKAR1AP10644 381 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 CPMP14384 443 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 COX7A2P14406 83 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 PORP16435 677 aaPredicted RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 CSNK2A2P19784 350 aaPredicted RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 XKP51811 444 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 CLNS1AP54105 237 aaKnown RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 EEF1A2Q05639 463 aaKnown RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 PDCD4Q53EL6 469 aaKnown RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 ATP1A1-AS1Q5TC04 95 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 METTL21CQ5VZV1 264 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 RIPOR1Q6ZS17 1223 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 CAMKMTQ7Z624 323 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 NATD1Q8N6N6 113 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 PPCDCQ96CD2 204 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 CNRIP1Q96F85 164 aaPredicted RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 THOC1Q96FV9 657 aaKnown RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 ZNF681Q96N22 645 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 DGAT2Q96PD7 388 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 PRPF18Q99633 342 aaKnown RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 LPAR4Q99677 370 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 TMEM120AQ9BXJ8 343 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 SLC35C2Q9NQQ7 365 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 C5AR2Q9P296 337 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 PPIEQ9UNP9 301 aaKnown RBP14.97□□□□□ -0.01
GPC1-207ENST00000466624 ENTPD4Q9Y227 616 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 MAN2B2Q9Y2E5 1009 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 ZNF780BQ9Y6R6 833 aa14.97□□□□□ -0.01
GPC1-207ENST00000466624 MYO1GB0I1T2 1018 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 E9PBE3 544 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 KLHL41O60662 606 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 LRATO95237 230 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 ATP1B1P05026 303 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 ATP4BP51164 291 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 ARFIP2P53365 341 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 SEC24CP53992 1094 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 AP2B1P63010 937 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 ID2Q02363 134 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 SPRED3Q2MJR0 410 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 DPY19L1Q2PZI1 675 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 DCAF10Q5QP82 559 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 TMEM198Q66K66 360 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 PAPD4Q6PIY7 484 aaKnown RBP14.96□□□□□ -0.01
GPC1-207ENST00000466624 LRRC25Q8N386 305 aaPredicted RBP14.96□□□□□ -0.01
GPC1-207ENST00000466624 OR14A16Q8NHC5 309 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 DAZLQ92904 295 aaKnown RBP14.96□□□□□ -0.01
GPC1-207ENST00000466624 GFM2Q969S9 779 aaKnown RBP14.96□□□□□ -0.01
GPC1-207ENST00000466624 EXOSC8Q96B26 276 aaKnown RBP14.96□□□□□ -0.01
GPC1-207ENST00000466624 TESCQ96BS2 214 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 COQ8BQ96D53 544 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 RBM18Q96H35 190 aaKnown RBP14.96□□□□□ -0.01
GPC1-207ENST00000466624 IMMP1LQ96LU5 166 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 MESP1Q9BRJ9 268 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 DPY30Q9C005 99 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 SDR39U1Q9NRG7 319 aaPredicted RBP14.96□□□□□ -0.01
GPC1-207ENST00000466624 PNO1Q9NRX1 252 aaKnown RBP14.96□□□□□ -0.01
GPC1-207ENST00000466624 ATAD3AQ9NVI7 634 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 ZIM2Q9NZV7 527 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 FBXL4Q9UKA2 621 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 TRIM33Q9UPN9 1127 aa14.96□□□□□ -0.01
GPC1-207ENST00000466624 GABRR3A8MPY1 467 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 AKAP10O43572 662 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 DYRK3O43781 588 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 OR10H2O60403 315 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 SHOX2O60902 331 aaPredicted RBP14.95□□□□□ -0.02
GPC1-207ENST00000466624 IFNA16P05015 189 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 ICAM2P13598 275 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 DRD4P21917 467 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 MPIP34949 423 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 FRKP42685 505 aaPredicted RBP14.95□□□□□ -0.02
GPC1-207ENST00000466624 SOX8P57073 446 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 CXADRP78310 365 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 AIMP2Q13155 320 aaKnown RBP14.95□□□□□ -0.02
GPC1-207ENST00000466624 RPS6KA2Q15349 733 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 EXT1Q16394 746 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 PLAG1Q6DJT9 500 aa14.95□□□□□ -0.02
GPC1-207ENST00000466624 APLFQ8IW19 511 aaPredicted RBP14.95□□□□□ -0.02
GPC1-207ENST00000466624 KRTCAP2Q8N6L1 136 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms