RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ZNF613Q6PF04 617 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZNF730Q6ZMV8 503 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 ADCK1Q86TW2 530 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 ITIH5Q86UX2 942 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 ICA1LQ8NDH6 482 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 RDH11Q8TC12 318 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 P3H4Q92791 437 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 MRPL38Q96DV4 380 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 MOCOSQ96EN8 888 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 CAPNS2Q96L46 248 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 KRT23Q9C075 422 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 PLEKHA3Q9HB20 300 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 IL1RAPQ9NPH3 570 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 NDUFA13Q9P0J0 144 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 TUBGCP4Q9UGJ1 667 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 ENTPD4Q9Y227 616 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 KIF7Q2M1P5 1343 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 NOTCH4Q99466 2003 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 NPC1L1Q9UHC9 1359 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 SH3PXD2BA1X283 911 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 TMCO5BA8MYB1 307 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 NEDD8-MDP1E9PL57 170 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 FBP2O00757 339 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZG16O60844 167 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 B3GALNT1O75752 331 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 STAM2O75886 525 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 GP9P14770 177 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 SLC6A8P48029 635 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZNF131P52739 623 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 NDST1P52848 882 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 RPL27P61353 136 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 LY6DQ14210 128 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 SLC17A1Q14916 467 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 HAGHQ16775 308 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 KNOP1Q1ED39 458 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 CMPK2Q5EBM0 449 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 TEX35Q5T0J7 233 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 FAM182AQ5T1J6 154 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 OTUD3Q5T2D3 398 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 IL23RQ5VWK5 629 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 RHBDD2Q6NTF9 364 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 NEPROQ6NW34 567 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 FAM159AQ6UWV7 190 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 CWC27Q6UX04 472 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 Q6ZRG5 221 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 ASRGL1Q7L266 308 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 GPR142Q7Z601 462 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 YRDCQ86U90 279 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 PARP8Q8N3A8 854 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 LRRC17Q8N6Y2 441 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 FAM71CQ8NEG0 241 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 LRRC15Q8TF66 581 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 MRPL24Q96A35 216 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 NAF1Q96HR8 494 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 SAMD8Q96LT4 415 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 ANKRD27Q96NW4 1050 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 AGAP3Q96P47 875 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 TAAR6Q96RI8 345 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 SYT11Q9BT88 431 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 NMNAT2Q9BZQ4 307 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 VPS33BQ9H267 617 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 CXXC4Q9H2H0 198 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 FAM124BQ9H5Z6 455 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 DCTPP1Q9H773 170 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 WDR41Q9HAD4 459 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 CNOT2Q9NZN8 540 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 ACTR3BQ9P1U1 418 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 LHX3Q9UBR4 397 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 NIP7Q9Y221 180 aaKnown RBP eCLIP3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 NUDCQ9Y266 331 aa3.64□□□□□ -1.83
CDC42BPA-211ENST00000466538 A0A0U1RRA0 63 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ASB14A6NK59 587 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ARHGEF33A8MVX0 844 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 NTN3O00634 580 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ANXA9O76027 345 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ADORA3P0DMS8 318 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 RALAP11233 206 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 GNSP15586 552 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 DNAJB1P25685 340 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 CCND2P30279 289 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 RABIFP47224 123 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 SLC1A6P48664 564 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 GMFBP60983 142 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 SRPXP78539 464 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 FKBP3Q00688 224 aaKnown RBP3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ELAVL2Q12926 359 aaKnown RBP3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 NME3Q13232 169 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZNF146Q15072 292 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ECSCRQ19T08 205 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 TAF1BQ53T94 588 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 CEP85LQ5SZL2 805 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 LIPJQ5W064 366 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 VPS36Q86VN1 386 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 SLC22A16Q86VW1 577 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 CARM1Q86X55 608 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 WDR49Q8IV35 697 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 PHC2Q8IXK0 858 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 LINC00518Q8N0U6 118 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 RNF148Q8N7C7 305 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms