RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 RGS1Q08116 209 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 MEP1AQ16819 746 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 TNFAIP8L2Q6P589 184 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-205ENST00000466192 CCDC80Q76M96 950 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 C6orf120Q7Z4R8 191 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 FAM174AQ8TBP5 190 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 UTP15Q8TED0 518 aaKnown RBP17.27■□□□□ 0.36
COL9A3-205ENST00000466192 GAL3ST3Q96A11 431 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 COL6A3P12111 3177 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 FAM221BA6H8Z2 402 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 C2orf74A8MZ97 194 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 GUCY1B2O75343 617 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 SLC35G6P0C7Q6 338 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 CYP4B1P13584 511 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 RRM2P31350 389 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 SPDYE7PQ495Y7 208 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 KDM4DQ6B0I6 523 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 TSEN54Q7Z6J9 526 aaKnown RBP17.26■□□□□ 0.35
COL9A3-205ENST00000466192 SMYD1Q8NB12 490 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 PIK3C3Q8NEB9 887 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 ADAMTS16Q8TE57 1224 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 ZDHHC1Q8WTX9 485 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 LZICQ8WZA0 190 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 SHDQ96IW2 340 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 MAPKAP1Q9BPZ7 522 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 CHRDQ9H2X0 955 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 RIBC2Q9H4K1 309 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 EXD2Q9NVH0 621 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 NDUFAF4Q9P032 175 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 KIF17Q9P2E2 1029 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 CES1P1Q9UKY3 287 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 ENTPD2Q9Y5L3 495 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 TP53BP1Q12888 1972 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-205ENST00000466192 LOC105369274A0A096LPK9 316 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 LOC102723532A0A0G2JNH3 316 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 A0A1W2PR77 199 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 PROM1O43490 865 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 SH3BP5O60239 455 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 ERAL1O75616 437 aaKnown RBP17.26■□□□□ 0.35
COL9A3-205ENST00000466192 PTGER1P34995 402 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 CCT3P49368 545 aaKnown RBP17.26■□□□□ 0.35
COL9A3-205ENST00000466192 HLCSP50747 726 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 PCBP3P57721 371 aaKnown RBP17.26■□□□□ 0.35
COL9A3-205ENST00000466192 PPP1CAP62136 330 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 HHEXQ03014 270 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 DUSP2Q05923 314 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 TGM3Q08188 693 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 ZNF750Q32MQ0 723 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 FRMPD2BQ6IN97 320 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 OR4N4Q8N0Y3 316 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 ATG16L2Q8NAA4 619 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 CNRIP1Q96F85 164 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-205ENST00000466192 RAB23Q9ULC3 237 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 ANGPT4Q9Y264 503 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 SPAG17Q6Q759 2223 aa17.26■□□□□ 0.35
COL9A3-205ENST00000466192 A0A1W2PS29 197 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 B4DGG1 531 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 BCKDKO14874 412 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SLC16A6O15403 523 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 C9P02748 559 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 CD38P28907 300 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 NCBP2P52298 156 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL9A3-205ENST00000466192 ESRRGP62508 458 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 CD47Q08722 323 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SIM2Q14190 667 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-205ENST00000466192 CTU2Q2VPK5 515 aaKnown RBP17.25■□□□□ 0.35
COL9A3-205ENST00000466192 IFI44LQ53G44 452 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 ZC3H12BQ5HYM0 836 aaKnown RBP17.25■□□□□ 0.35
COL9A3-205ENST00000466192 CRB2Q5IJ48 1285 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 ZNF691Q5VV52 312 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SLC48A1Q6P1K1 146 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 ZNF438Q7Z4V0 828 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SLC44A2Q8IWA5 706 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-205ENST00000466192 NRBF2Q96F24 287 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 GUCD1Q96NT3 240 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 BBS4Q96RK4 519 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 NPLQ9BXD5 320 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-205ENST00000466192 ANKMY1Q9P2S6 941 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 TESMINQ9Y4I5 508 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 KLK4Q9Y5K2 254 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SMIM10L1P0DMW3 83 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 ISL1P61371 349 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 TP53BP2Q13625 1128 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 KCTD8Q6ZWB6 473 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SZRD1Q7Z422 152 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 GPR141Q7Z602 305 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 CHDHQ8NE62 594 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SUN3Q8TAQ9 357 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 BAHD1Q8TBE0 780 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-205ENST00000466192 ZCCHC10Q8TBK6 192 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 RAB8BQ92930 207 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SMIM10Q96HG1 83 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 NELL2Q99435 816 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 SERHL2Q9H4I8 314 aa17.25■□□□□ 0.35
COL9A3-205ENST00000466192 PRAMEF25A6NGN4 478 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 CSF2P04141 144 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 ALPPL2P10696 532 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 ITGAMP11215 1152 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 CRHBPP24387 322 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 NTSP30990 170 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms