RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 DIMT1Q9UNQ2 313 aaKnown RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 GPRASP1Q5JY77 1395 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 CENPJQ9HC77 1338 aaPredicted RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 MYH15Q9Y2K3 1946 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 IGLV4-3A0A075B6K6 122 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 IGHV3OR16-10A0A075B7F0 116 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 LOC390937A0A1W2PQ73 354 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 BCLAF3A2AJT9 711 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 NEDD8-MDP1E9PL57 170 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 PDHXO00330 501 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 NTN3O00634 580 aaPredicted RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 ARPC1BO15143 372 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 NME2P1O60361 137 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 POP4O95707 220 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 CXCL10P02778 98 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 FHP07954 510 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 ACADSBP45954 432 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 SLC1A6P48664 564 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 RIDAP52758 137 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 LIMK2P53671 638 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 LY6DQ14210 128 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 SLC17A1Q14916 467 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 P2RY14Q15391 338 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 CARTPTQ16568 116 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 CCDC40Q4G0X9 1142 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 GPAT3Q53EU6 434 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 TEX35Q5T0J7 233 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 ASRGL1Q7L266 308 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 TAF8Q7Z7C8 310 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 ADAMTSL2Q86TH1 951 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF619Q8N2I2 560 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 HDDC3Q8N4P3 179 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 BANPQ8N9N5 519 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 COLGALT1Q8NBJ5 622 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 RDH11Q8TC12 318 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 KIAA1524Q8TCG1 905 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 MIPOL1Q8TD10 442 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 U2AF1L4Q8WU68 220 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 PCNPQ8WW12 178 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 NSMCE2Q96MF7 247 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 TMEM237Q96Q45 408 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 RBM4BQ9BQ04 359 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 CHCHD5Q9BSY4 110 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 OCR1Q9BZK8 76 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 XPO4Q9C0E2 1151 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 PANK3Q9H999 370 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 DEPPQ9NTK1 212 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 THYN1Q9P016 225 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 NDUFA13Q9P0J0 144 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 FAM153AQ9UHL3 310 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 ENTPD4Q9Y227 616 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 RPH3AQ9Y2J0 694 aaPredicted RBP3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 MOB4Q9Y3A3 225 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 AUP1Q9Y679 476 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 PRSS21Q9Y6M0 314 aa3.04□□□□□ -1.92
HMGXB4-205ENST00000464480 RPGRIP1LQ68CZ1 1315 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 FANCIQ9NVI1 1328 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 SH3PXD2BA1X283 911 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 CFAP73A6NFT4 308 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 IGLON5A6NGN9 336 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 ARHGEF33A8MVX0 844 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 MEI4A8MW99 385 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 A8MXK9 166 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 SSX5O60225 188 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 SYNGR4O95473 234 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 PGK2P07205 417 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 HIST1H2AGP0C0S8 130 aaPredicted RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 ID1P41134 155 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 NUMBP49757 651 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 VEGFCP49767 419 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 NDUFV3P56181 108 aaKnown RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 RPS27AP62979 156 aaKnown RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 IRX3P78415 501 aaPredicted RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 MS4A2Q01362 244 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 EPC2Q52LR7 807 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 PARP10Q53GL7 1025 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 CCDC92Q53HC0 331 aaPredicted RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 CMPK2Q5EBM0 449 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 HERC4Q5GLZ8 1057 aaPredicted RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 FAM182AQ5T1J6 154 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 NEK5Q6P3R8 708 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 FAM43BQ6ZT52 329 aaPredicted RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 ITIH5Q86UX2 942 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF440Q8IYI8 595 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 KDM8Q8N371 416 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 OR52E1Q8NGJ3 308 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 CHPT1Q8WUD6 406 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 HIST1H2ACQ93077 130 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 COG3Q96JB2 828 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 RCHY1Q96PM5 261 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 CABLES2Q9BTV7 478 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 FTHL17Q9BXU8 183 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 TUBB1Q9H4B7 451 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 GTSE1Q9NYZ3 720 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 EIF3KQ9UBQ5 218 aaKnown RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 CTSZQ9UBR2 303 aa3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 HOOK1Q9UJC3 728 aaKnown RBP3.03□□□□□ -1.92
HMGXB4-205ENST00000464480 ABCC9O60706 1549 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms