RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 MT-ATP6P00846 226 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 PGK2P07205 417 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 SERPINF2P08697 491 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 CCDC192P0DO97 292 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 KRT5P13647 590 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 RPA1P27694 616 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 PRDX6P30041 224 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 MTIF2P46199 727 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 ABCE1P61221 599 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 RPS27AP62979 156 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 RIGQ13278 110 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 GAMTQ14353 236 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 KARSQ15046 597 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 UPP1Q16831 310 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 MTHFSDQ2M296 383 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 CCDC40Q4G0X9 1142 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 CMPK2Q5EBM0 449 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 HERC4Q5GLZ8 1057 aaPredicted RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 TEX35Q5T0J7 233 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 LIPJQ5W064 366 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 RTL6Q6ICC9 239 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 GALNT17Q6IS24 598 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 NEK5Q6P3R8 708 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 ABRAXAS1Q6UWZ7 409 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 TAF8Q7Z7C8 310 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 SLC22A16Q86VW1 577 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 KDM8Q8N371 416 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 OR6F1Q8NGZ6 308 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 C11orf52Q96A22 123 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 MRPL38Q96DV4 380 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 COG3Q96JB2 828 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 SAMD8Q96LT4 415 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 NSMCE2Q96MF7 247 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 PRICKLE1Q96MT3 831 aaPredicted RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 FAM111AQ96PZ2 611 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 SPAG8Q99932 426 aaPredicted RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 OPRPNQ99935 248 aaPredicted RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 KRT23Q9C075 422 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 UPF3AQ9H1J1 476 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 SLC25A19Q9HC21 320 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 GDF3Q9NR23 364 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 NDE1Q9NXR1 346 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 THAP10Q9P2Z0 257 aaPredicted RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 XPO7Q9UIA9 1087 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 CCPG1Q9ULG6 757 aa3.91□□□□□ -1.78
USP25-207ENST00000464435 MRPS2Q9Y399 296 aaKnown RBP3.91□□□□□ -1.78
USP25-207ENST00000464435 LOC105371242A0A075B767 164 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 YJEFN3A6XGL0 299 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 ZNF724A8MTY0 619 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.9□□□□□ -1.79
USP25-207ENST00000464435 INPP4BO15327 924 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 TXNL1O43396 289 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 OR6A2O95222 327 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 PTBP3O95758 552 aaKnown RBP3.9□□□□□ -1.79
USP25-207ENST00000464435 FHP07954 510 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 CCNA2P20248 432 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 IL10P22301 178 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 PKLRP30613 574 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 FCGR2BP31994 310 aaPredicted RBP3.9□□□□□ -1.79
USP25-207ENST00000464435 FCGR2CP31995 323 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 HSPA1LP34931 641 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 SLC17A1Q14916 467 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 P2RY14Q15391 338 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 TOR1AIP1Q5JTV8 583 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 UNC5DQ6UXZ4 953 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 METTL4Q8N3J2 472 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 Q8NBF4 154 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 P3H4Q92791 437 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 POM121L2Q96KW2 1035 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 C16orf45Q96MC5 204 aaPredicted RBP3.9□□□□□ -1.79
USP25-207ENST00000464435 TNFRSF13CQ96RJ3 184 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 COQ7Q99807 217 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 FGFBP2Q9BYJ0 223 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 EGLN1Q9GZT9 426 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 GFRA4Q9GZZ7 299 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 PARLQ9H300 379 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 SOHLH2Q9NX45 425 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 PLA2G4CQ9UP65 541 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 IKBKGQ9Y6K9 419 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 KIF7Q2M1P5 1343 aa3.9□□□□□ -1.79
USP25-207ENST00000464435 TRBV5-4A0A0C4DH59 114 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 LOC390937A0A1W2PQ73 354 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 ARHGEF9O43307 516 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 IDH3BO43837 385 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 NME2P1O60361 137 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 SNAP91O60641 907 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 PDGFBP01127 241 aaPredicted RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 PROS1P07225 676 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 PTPN4P29074 926 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 ZFP36L2P47974 494 aaKnown RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 CRYBA2P53672 197 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 TMEM50BP56557 158 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 KLF5Q13887 457 aaPredicted RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 FASTKD3Q14CZ7 662 aaKnown RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 TAF7Q15545 349 aaPredicted RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 CARTPTQ16568 116 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 ZNF528Q3MIS6 628 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 C14orf177Q52M58 125 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 FASTKD1Q53R41 847 aaKnown RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms