RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 HERV-K104P63124 156 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 CDKL1Q00532 357 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 CBX3Q13185 183 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 P2RY14Q15391 338 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 DDI2Q5TDH0 399 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 RTL6Q6ICC9 239 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 Q6ZRG5 221 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 NUFIP2Q7Z417 695 aaKnown RBP3.41□□□□□ -1.86
USP9X-204ENST00000463829 WDR49Q8IV35 697 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 LMNTD2Q8IXW0 634 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 POM121L12Q8N7R1 296 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 ZNF781Q8N8C0 355 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 CSNK1G2-AS1Q8NCQ2 148 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 RPGRIP1Q96KN7 1286 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 RUNDC3BQ96NL0 473 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 PRAM1Q96QH2 718 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 NAP1L3Q99457 506 aaPredicted RBP3.41□□□□□ -1.86
USP9X-204ENST00000463829 HSD17B14Q9BPX1 270 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 ZNF577Q9BSK1 485 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 ACAT2Q9BWD1 397 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 CXXC4Q9H2H0 198 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 ADNPQ9H2P0 1102 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 NT5DC2Q9H857 520 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 VPS54Q9P1Q0 977 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 SPATA2Q9UM82 520 aa3.41□□□□□ -1.86
USP9X-204ENST00000463829 TDRKHQ9Y2W6 561 aaKnown RBP3.41□□□□□ -1.86
USP9X-204ENST00000463829 SH3PXD2BA1X283 911 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 TRIM64A6NGJ6 449 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 TRIM64BA6NI03 449 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 RPL37AP8A6NKH3 93 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 EEF2KO00418 725 aaKnown RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 GALR3O60755 368 aaPredicted RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 PDGFBP01127 241 aaPredicted RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 MBL2P11226 248 aaPredicted RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 VDRP11473 427 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 AREGP15514 252 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 MTIF2P46199 727 aaKnown RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 GSK3BP49841 420 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 SLC12A3P55017 1021 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 GALK2Q01415 458 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 GFPT1Q06210 699 aaPredicted RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 COX10Q12887 443 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 MSLNQ13421 630 aaPredicted RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 HFEQ30201 348 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 DCAF12Q5T6F0 453 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 EMBQ6PCB8 327 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 TIPARPQ7Z3E1 657 aaKnown RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 ITIH5Q86UX2 942 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 SLC25A42Q86VD7 318 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 PARP8Q8N3A8 854 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 SAMD12Q8N8I0 201 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 TOMM40LQ969M1 308 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 ANKRD9Q96BM1 317 aaPredicted RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 MRPL53Q96EL3 112 aaKnown RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 C16orf58Q96GQ5 468 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 ZNF560Q96MR9 790 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 PYGO2Q9BRQ0 406 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 FUNDC2Q9BWH2 189 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 TRPV6Q9H1D0 765 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 DPEP3Q9H4B8 488 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 PRMT8Q9NR22 394 aaPredicted RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 PIGVQ9NUD9 493 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 AKAP7Q9P0M2 348 aaPredicted RBP3.4□□□□□ -1.87
USP9X-204ENST00000463829 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.4□□□□□ -1.87
USP9X-204ENST00000463829 FBXO7Q9Y3I1 522 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 CSAG2Q9Y5P2 127 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 MMP24Q9Y5R2 645 aa3.4□□□□□ -1.87
USP9X-204ENST00000463829 DHX29Q7Z478 1369 aaKnown RBP3.39□□□□□ -1.87
USP9X-204ENST00000463829 IGHV3-16A0A0C4DH30 117 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 MEI4A8MW99 385 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 VEGFDO43915 354 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 TSPAN2O60636 221 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 DUSP11O75319 330 aaKnown RBP3.39□□□□□ -1.87
USP9X-204ENST00000463829 MT-ND1P03886 318 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 IL4RP24394 825 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 PTGER3P43115 390 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 TAF6P49848 677 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 LIMK2P53671 638 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 CCZ1BP86790 482 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 CCZ1P86791 482 aaPredicted RBP3.39□□□□□ -1.87
USP9X-204ENST00000463829 AP1B1Q10567 949 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 PPP2R5CQ13362 524 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 EMC2Q15006 297 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 EPC2Q52LR7 807 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 AGAP7PQ5VUJ5 663 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 LIPJQ5W064 366 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 ETFRF1Q6IPR1 90 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 LRRC49Q8IUZ0 686 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 PEX5LQ8IYB4 626 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 RTL3Q8N8U3 475 aaKnown RBP3.39□□□□□ -1.87
USP9X-204ENST00000463829 ZNRF1Q8ND25 227 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 BEST4Q8NFU0 473 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 OR1K1Q8NGR3 316 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 FBXO25Q8TCJ0 367 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 PNPLA2Q96AD5 504 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 SLCO4A1Q96BD0 722 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 RAB39BQ96DA2 213 aa3.39□□□□□ -1.87
USP9X-204ENST00000463829 GPR137Q96N19 417 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms