RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 ATP6AP2A0A1C7CYW4 349 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 ZSCAN5CA6NGD5 496 aaPredicted RBP4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 H0YIG0 161 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 CSO75390 466 aaKnown RBP4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 CSDE1O75534 798 aaKnown RBP4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 PDGFBP01127 241 aaPredicted RBP4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 FASP25445 335 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 HMGCS2P54868 508 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 LCP2Q13094 533 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 CRMP1Q14194 572 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 CAPN13Q6MZZ7 669 aaPredicted RBP4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 CGB2Q6NT52 195 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 CYP4V2Q6ZWL3 525 aaPredicted RBP4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 KLHL7Q8IXQ5 586 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 PARP8Q8N3A8 854 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 DEPDC1BQ8WUY9 529 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 MR1Q95460 341 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 PPP1R16AQ96I34 528 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 NCOA1Q15788 1441 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 DENND4BO75064 1496 aaPredicted RBP4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 NEO1Q92859 1461 aa4.37□□□□□ -1.71
CCDC144A-211ENST00000463809 TTC37Q6PGP7 1564 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 MAGEB16A2A368 324 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 LRRTM2O43300 516 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 SYT7O43581 403 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 RHBDL1O75783 438 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 GLRA1P23415 457 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 RPL27P61353 136 aaKnown RBP4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 AQP12AQ8IXF9 295 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 AFAP1L1Q8TED9 768 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 UBLCP1Q8WVY7 318 aaPredicted RBP4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 RAB40CQ96S21 281 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 TEX13BQ9BXU2 312 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 CUEDC2Q9H467 287 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 SRD5A3Q9H8P0 318 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 FAM212BQ9NTI7 297 aaPredicted RBP4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 CLIP2Q9UDT6 1046 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 RSPH14Q9UHP6 348 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 PTPRKQ15262 1439 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 ZFYVE16Q7Z3T8 1539 aa4.36□□□□□ -1.71
CCDC144A-211ENST00000463809 STRCQ7RTU9 1775 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 A0A087X0K7 114 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 MCF2LO15068 1137 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 TSC22D2O75157 780 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 HSPA4LO95757 839 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 SCG2P13521 617 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 KRTAP10-8P60410 259 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 ARHGAP1Q07960 439 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 ZNF79Q15937 498 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 WDR25Q64LD2 544 aaPredicted RBP4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 NHLRC1Q6VVB1 395 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 TICAM2Q86XR7 235 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 OR1K1Q8NGR3 316 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 TCP11Q8WWU5 503 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 ZBED6CLQ96FA7 236 aaPredicted RBP4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 LRRC2Q9BYS8 371 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 PLEK2Q9NYT0 353 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 IKZF3Q9UKT9 509 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 EXOC6BQ9Y2D4 811 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 OR1A2Q9Y585 309 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 EFCAB5A4FU69 1503 aa4.35□□□□□ -1.71
CCDC144A-211ENST00000463809 DUSP11O75319 330 aaKnown RBP4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 TBCAO75347 108 aaKnown RBP4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 RAD51DO75771 328 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 DRD3P35462 400 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 PTK6Q13882 451 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 SPHARQ15513 63 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 SNRNP48Q6IEG0 339 aaKnown RBP4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 SHQ1Q6PI26 577 aaKnown RBP4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 MSANTD1Q6ZTZ1 278 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 SLC22A18ASQ8N1D0 253 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 GVQW1Q8N7I0 195 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 CCDC197Q8NCU1 140 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 SPATA18Q8TC71 538 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 GANCQ8TET4 914 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 PCED1BQ96HM7 432 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 ZNF559Q9BR84 538 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 MLPHQ9BV36 600 aaPredicted RBP4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 THUMPD3Q9BV44 507 aaKnown RBP4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 TUFT1Q9NNX1 390 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 AMBNQ9NP70 447 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 VPS18Q9P253 973 aa4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 KLF2Q9Y5W3 355 aaPredicted RBP4.34□□□□□ -1.71
CCDC144A-211ENST00000463809 IQGAP2Q13576 1575 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 ACEP12821 1306 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 OOEPA6NGQ2 149 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 SDR42E2A6NKP2 422 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 RNF212BA8MTL3 300 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 KIAA0513O60268 411 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 NME6O75414 186 aaPredicted RBP4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 TNFRSF4P43489 277 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 TTC31Q49AM3 519 aaPredicted RBP4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 FAM47EQ6ZV65 393 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 C17orf64Q86WR6 236 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 WDR49Q8IV35 697 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 KLHDC8AQ8IYD2 350 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 MRPL24Q96A35 216 aaKnown RBP4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 ESAMQ96AP7 390 aa4.33□□□□□ -1.72
CCDC144A-211ENST00000463809 SNRNP40Q96DI7 357 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms