RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 VPS29Q9UBQ0 182 aa12.5□□□□□ -0.41
COMMD3-205ENST00000463688 KLF2Q9Y5W3 355 aaPredicted RBP12.5□□□□□ -0.41
COMMD3-205ENST00000463688 C1orf226A1L170 272 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 A8MT66 165 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 RTCAO00442 366 aaKnown RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 PEX1O43933 1283 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 LDB3O75112 727 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 CRCPO75575 148 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 BCAS2O75934 225 aaPredicted RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 ABOP16442 354 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 BSGP35613 385 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 CA7P43166 264 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 HEPACAMQ14CZ8 416 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 SPIN4Q56A73 249 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 TMEM211Q6ICI0 200 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 RNF111Q6ZNA4 994 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 SPPL2CQ8IUH8 684 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 ZFP62Q8NB50 900 aaPredicted RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 OR4F6Q8NGB9 312 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 C16orf52Q8NHV5 167 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 METTL6Q8TCB7 284 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 UBLCP1Q8WVY7 318 aaPredicted RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 TP53INP1Q96A56 240 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 ANKRD9Q96BM1 317 aaPredicted RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 METTL2AQ96IZ6 378 aaKnown RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 FAM173AQ9BQD7 235 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 IQCGQ9H095 443 aaKnown RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 SEMA4BQ9NPR2 832 aaPredicted RBP12.49□□□□□ -0.41
COMMD3-205ENST00000463688 SACM1LQ9NTJ5 587 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 GIMAP4Q9NUV9 329 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 SLC12A4Q9UP95 1085 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 ATG4BQ9Y4P1 393 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 ASB4Q9Y574 426 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 ZNF780BQ9Y6R6 833 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 SCN2AQ99250 2005 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 SCN3AQ9NY46 2000 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 SHANK1Q9Y566 2161 aa12.49□□□□□ -0.41
COMMD3-205ENST00000463688 FAM47E-STBD1D6RA91 191 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 NPIPA5E9PKD4 350 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 CCL21O00585 134 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 TP53I11O14683 189 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 OR2J2O76002 312 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 MYL2P10916 166 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 CSNK2A2P19784 350 aaPredicted RBP12.48□□□□□ -0.41
COMMD3-205ENST00000463688 CNR1P21554 472 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 HSD17B3P37058 310 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 PLGLB1Q02325 96 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 PIGGQ5H8A4 983 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 ZNF678Q5SXM1 525 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 ADNP2Q6IQ32 1131 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 Q6ZPB1 254 aaPredicted RBP12.48□□□□□ -0.41
COMMD3-205ENST00000463688 METTL4Q8N3J2 472 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 PSD4Q8NDX1 1056 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 C17orf47Q8NEP4 570 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 OR52B6Q8NGF0 335 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 ERP27Q96DN0 273 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 RASL10BQ96S79 203 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 SECISBP2Q96T21 854 aaKnown RBP12.48□□□□□ -0.41
COMMD3-205ENST00000463688 NPAS2Q99743 824 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 B4GALT7Q9UBV7 327 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
COMMD3-205ENST00000463688 NPIPA1Q9UND3 350 aa12.48□□□□□ -0.41
COMMD3-205ENST00000463688 OR14I1A6ND48 311 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 FGF17O60258 216 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 SH3BGRLO75368 114 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 KLK1P06870 262 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 HOXD4P09016 255 aaPredicted RBP12.47□□□□□ -0.41
COMMD3-205ENST00000463688 DRD2P14416 443 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 PORP16435 677 aaPredicted RBP12.47□□□□□ -0.41
COMMD3-205ENST00000463688 MEOX1P50221 254 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 NEK2P51955 445 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 HNRNPFP52597 415 aaKnown RBP12.47□□□□□ -0.41
COMMD3-205ENST00000463688 HK2P52789 917 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 KCNK10P57789 538 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 DCAF7P61962 342 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 TRAF3Q13114 568 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 SF3B4Q15427 424 aaKnown RBP eCLIP12.47□□□□□ -0.41
COMMD3-205ENST00000463688 SLC22A10Q63ZE4 541 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 IL20RBQ6UXL0 311 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 FJX1Q86VR8 437 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 SULF2Q8IWU5 870 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 GALNT12Q8IXK2 581 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 TMEM52Q8NDY8 209 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 FAM76AQ8TAV0 307 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 PHF10Q8WUB8 498 aaKnown RBP12.47□□□□□ -0.41
COMMD3-205ENST00000463688 L3HYPDHQ96EM0 354 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 TRMOQ9BU70 441 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 CNPPD1Q9BV87 410 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 TXLNGYQ9BZA5 131 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 ZNF358Q9NW07 568 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 PRODH2Q9UF12 536 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 CLDN16Q9Y5I7 305 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 HIVEP3Q5T1R4 2406 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 RELNP78509 3460 aa12.47□□□□□ -0.41
COMMD3-205ENST00000463688 SVILO95425 2214 aa12.46□□□□□ -0.41
COMMD3-205ENST00000463688 A0A1W2PR48 441 aa12.46□□□□□ -0.41
COMMD3-205ENST00000463688 SERTM1A2A2V5 107 aa12.46□□□□□ -0.41
COMMD3-205ENST00000463688 WWP2O00308 870 aa12.46□□□□□ -0.41
COMMD3-205ENST00000463688 COPEO14579 308 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms