RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 FBXO48Q5FWF7 155 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ATP1A1-AS1Q5TC04 95 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM220Q6QAJ8 160 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ENPP7Q6UWV6 458 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 LRIG3Q6UXM1 1119 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 CYHR1Q6ZMK1 362 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 MBOAT1Q6ZNC8 495 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 NLRP9Q7RTR0 991 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 PIWIL4Q7Z3Z4 852 aaKnown RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ARHGAP22Q7Z5H3 698 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 LRRC6Q86X45 466 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 NRROSQ86YC3 692 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 TDRPQ86YL5 185 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 CPNE9Q8IYJ1 553 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 GALNT4Q8N4A0 578 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 GDAP1Q8TB36 358 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 PATE1Q8WXA2 126 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 STARD8Q92502 1023 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 KIAA1143Q96AT1 154 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 PTERQ96BW5 349 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ELMO2Q96JJ3 720 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 CPNE1Q99829 537 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ZPBPQ9BS86 351 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 FAM167BQ9BTA0 163 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 NAT9Q9BTE0 207 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ZSCAN5AQ9BUG6 496 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 WDR26Q9H7D7 661 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ASIC5Q9NY37 505 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 SLC17A7Q9P2U7 560 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 PSMC3IPQ9P2W1 217 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 SLC39A10Q9ULF5 831 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 SUFUQ9UMX1 484 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ENTPD4Q9Y227 616 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 KCNK6Q9Y257 313 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 SLC17A4Q9Y2C5 497 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 DNAJC16Q9Y2G8 782 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 WDR37Q9Y2I8 494 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ZFC3H1O60293 1989 aaKnown RBP3.45□□□□□ -1.86
SCFD1-204ENST00000463622 PCNX1Q96RV3 2341 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 ESPL1Q14674 2120 aa3.45□□□□□ -1.86
SCFD1-204ENST00000463622 POLEQ07864 2286 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TRPM6Q9BX84 2022 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SLC5A10A0PJK1 596 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RGSL1A5PLK6 1076 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 H7C1Q1 480 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CDC7O00311 574 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PRMT5O14744 637 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ZW10O43264 779 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ZBTB14O43829 449 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TYROBPO43914 113 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 NDUFS3O75489 264 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SPAG6O75602 509 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CDK14O94921 469 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RASAL1O95294 804 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TUBBP07437 444 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 INHBAP08476 426 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ACP5P13686 325 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ATP1B2P14415 290 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 BRAFP15056 766 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RPS3P23396 243 aaKnown RBP eCLIP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ALDH4A1P30038 563 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 AKT1P31749 480 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ARRB2P32121 409 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CSTF2P33240 577 aaKnown RBP eCLIP3.44□□□□□ -1.866e-6■■□□□ 13.8
SCFD1-204ENST00000463622 PTGER1P34995 402 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PHBP35232 272 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 BDKRB1P46663 353 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GNPDA1P46926 289 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 MAGOHP61326 146 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 IFFO1Q0D2I5 559 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GBX1Q14549 363 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ITIH4Q14624 930 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 OR4D1Q15615 310 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PHKG1Q16816 387 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 AMZ1Q400G9 498 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 NADK2Q4G0N4 442 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 BCL7AQ4VC05 210 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PYCR3Q53H96 274 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GRTP1Q5TC63 336 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CACHD1Q5VU97 1274 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 MRNIPQ6NTE8 343 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM71Q6P5X7 295 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RPS27LQ71UM5 84 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 BCDIN3DQ7Z5W3 292 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TAF8Q7Z7C8 310 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RASGRP3Q8IV61 690 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SPARTQ8N0X7 666 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 NDUFAF2Q8N183 169 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 DTX3LQ8TDB6 740 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 EEF1AKMT1Q8WVE0 214 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 NXNL1Q96CM4 212 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PKNOX2Q96KN3 472 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RMDN2Q96LZ7 410 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 COPS8Q99627 209 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 BARD1Q99728 777 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CENPHQ9H3R5 247 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 VIPAS39Q9H9C1 493 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SPATS2LQ9NUQ6 558 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 INTS10Q9NVR2 710 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms