RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TOXO94900 526 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 TGFB1P01137 390 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 PROCP04070 461 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 TPOP07202 933 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 GSTA1P08263 222 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 PCNAP12004 261 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 JAK1P23458 1154 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 ATP5A1P25705 553 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 MSX1P28360 303 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SERPINB1P30740 379 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 PTGS2P35354 604 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 PLA2G16P53816 162 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 LIM2P55344 173 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 RAB38P57729 211 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 RPS13P62277 151 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SKP1P63208 163 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 BTN3A2P78410 334 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 ACTN3Q08043 901 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 DDX39BQ13838 428 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 HIST2H2ACQ16777 129 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 ERCC6LQ2NKX8 1250 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 GGTA1PQ4G0N0 100 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 UNC50Q53HI1 259 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF678Q5SXM1 525 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SWT1Q5T5J6 900 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 DEPDC1Q5TB30 811 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 LGSNQ5TDP6 509 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 HIST2H2AA3Q6FI13 130 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 NIPAL1Q6NVV3 410 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 LETMD1Q6P1Q0 360 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 TRIM40Q6P9F5 258 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 EMBQ6PCB8 327 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 MDGA2Q7Z553 956 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 LCA5Q86VQ0 697 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SULF2Q8IWU5 870 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SCUBE1Q8IWY4 988 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZFP62Q8NB50 900 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 POGLUT1Q8NBL1 392 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR4F6Q8NGB9 312 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 C16orf52Q8NHV5 167 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 UBE2E3Q969T4 207 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SERINC2Q96SA4 455 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SORBS1Q9BX66 1292 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 NPLQ9BXD5 320 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR51B5Q9H339 312 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 C12orf65Q9H3J6 166 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 ACTR8Q9H981 624 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 PPCSQ9HAB8 311 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 CLK4Q9HAZ1 481 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 NECTIN3Q9NQS3 549 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 DEPPQ9NTK1 212 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 KCMF1Q9P0J7 381 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 RAB21Q9UL25 225 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 DAPP1Q9UN19 280 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 RNF6Q9Y252 685 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 KLF13Q9Y2Y9 288 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 ANGPTL3Q9Y5C1 460 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 JMJD1CQ15652 2540 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A0G2JMM0 328 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 TRBV11-1A0A0K0K1C0 115 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A1W2PPB8 328 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A1W2PRS3 328 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PINLYPA6NC86 204 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 TMEM200CA6NKL6 621 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 FAM90A27PA6NNH2 459 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 KIR3DP1A8MWS1 328 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 G3V2L1 256 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 SAP18O00422 153 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 B3GALT2O43825 422 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PEX1O43933 1283 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRKNO60260 465 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CDC40O60508 579 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CDH16O75309 829 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 GLRA3O75311 464 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CLDN9O95484 217 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 TSPAN8P19075 237 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 HIST1H1TP22492 207 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 ATP5F1P24539 256 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PIK3CBP42338 1070 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 GPR143P51810 404 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CCNG1P51959 295 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRKAA2P54646 552 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 MTTPP55157 894 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CDH13P55290 713 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 HNRNPH2P55795 449 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 GPR85P60893 370 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 HERVK_113P63132 956 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CLCQ05315 142 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 SLC18A2Q05940 514 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CPSF6Q16630 551 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 TMEM35AQ53FP2 167 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 KHDRBS2Q5VWX1 349 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 MRM1Q6IN84 353 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 DMRTC2Q8IXT2 367 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 EID3Q8N140 333 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CYP4Z2PQ8N1L4 340 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 MREGQ8N565 214 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 ACOT4Q8N9L9 421 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 FAM47BQ8NA70 645 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR52N2Q8NGI0 321 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms