RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 GYS2P54840 703 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 AQP5P55064 265 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 PLIN5Q00G26 463 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 ELAVL1Q15717 326 aaKnown RBP11.03□□□□□ -0.64
CPNE1-221ENST00000462352 ZNF750Q32MQ0 723 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 FAM180BQ6P0A1 224 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 BORAQ6PGQ7 559 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 TICAM1Q8IUC6 712 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 APLFQ8IW19 511 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-221ENST00000462352 ST13P4Q8IZP2 240 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-221ENST00000462352 CLEC1AQ8NC01 280 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 CEP70Q8NHQ1 597 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 PTPMT1Q8WUK0 201 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-221ENST00000462352 APOBEC4Q8WW27 367 aaKnown RBP11.03□□□□□ -0.64
CPNE1-221ENST00000462352 EXTL1Q92935 676 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 EXOSC8Q96B26 276 aaKnown RBP11.03□□□□□ -0.64
CPNE1-221ENST00000462352 PPWD1Q96BP3 646 aaKnown RBP11.03□□□□□ -0.64
CPNE1-221ENST00000462352 THOC1Q96FV9 657 aaKnown RBP11.03□□□□□ -0.64
CPNE1-221ENST00000462352 DGAT2Q96PD7 388 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 OR52B2Q96RD2 323 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 EBF4Q9BQW3 602 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 TRIM55Q9BYV6 548 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 ADAP2Q9NPF8 381 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 EHD3Q9NZN3 535 aa11.03□□□□□ -0.64
CPNE1-221ENST00000462352 C17orf105B2RV13 164 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 DNAJB5O75953 348 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 SLC35E2P0CK97 266 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 CPMP14384 443 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 COX7A2P14406 83 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 PORP16435 677 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-221ENST00000462352 TNNI3P19429 210 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 FEN1P39748 380 aaKnown RBP11.02□□□□□ -0.65
CPNE1-221ENST00000462352 IDH3AP50213 366 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 SLC26A5P58743 744 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 Q0VFX4 171 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 AIMP2Q13155 320 aaKnown RBP11.02□□□□□ -0.65
CPNE1-221ENST00000462352 PDE7AQ13946 482 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 TERF2Q15554 542 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 PRSS53Q2L4Q9 553 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 BTBD16Q32M84 506 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 LSM12Q3MHD2 195 aaKnown RBP11.02□□□□□ -0.65
CPNE1-221ENST00000462352 DGAT2L6Q6ZPD8 337 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 ACAD11Q709F0 780 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 SPATA19Q7Z5L4 167 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 NFAM1Q8NET5 270 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-221ENST00000462352 RFWD2Q8NHY2 731 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 CNRIP1Q96F85 164 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-221ENST00000462352 RBM18Q96H35 190 aaKnown RBP11.02□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF681Q96N22 645 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 PELOQ9BRX2 385 aaKnown RBP11.02□□□□□ -0.65
CPNE1-221ENST00000462352 REEP4Q9H6H4 257 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 NPHS2Q9NP85 383 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 TCF7L2Q9NQB0 619 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 SLC35C2Q9NQQ7 365 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 FAM53CQ9NYF3 392 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 TAS2R7Q9NYW3 318 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 CLCA3PQ9Y6N3 262 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF780BQ9Y6R6 833 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 MGAQ8IWI9 3026 aa11.02□□□□□ -0.65
CPNE1-221ENST00000462352 LOC400499M0QZD8 3231 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 GABRR3A8MPY1 467 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 SCAMP2O15127 329 aaKnown RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 POLR3GO15318 223 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 OR10H2O60403 315 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 TBX19O60806 448 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 SERPINA7P05543 415 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 CELA2AP08217 269 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 ICAM2P13598 275 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 CSNK2A2P19784 350 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 ITGA3P26006 1051 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 HPCAL1P37235 193 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 CCL11P51671 97 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 SOX8P57073 446 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 RHDQ02161 417 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 DUSP2Q05923 314 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 CEBPEQ15744 281 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 EXT1Q16394 746 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 TMEM198Q66K66 360 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 PLAG1Q6DJT9 500 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 ANKRD26P1Q6NSI1 321 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 CGB2Q6NT52 195 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 RIMKLAQ8IXN7 391 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 KBTBD2Q8IY47 623 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 SAMD14Q8IZD0 417 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 LRRC25Q8N386 305 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 GALNT16Q8N428 558 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 KRTCAP2Q8N6L1 136 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 B3GNT7Q8NFL0 401 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 OR14A16Q8NHC5 309 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 M1APQ8TC57 530 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 NUDT8Q8WV74 236 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 DAZLQ92904 295 aaKnown RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 PPCDCQ96CD2 204 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 MTERF3Q96E29 417 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF764Q96H86 408 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF317Q96PQ6 595 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 SIKE1Q9BRV8 207 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 CCDC28BQ9BUN5 200 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms