RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ULK1O75385 1050 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 ESRRBO95718 433 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 CPA3P15088 417 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 MAPK12P53778 367 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 DNAJB13P59910 316 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 PMP22Q01453 160 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 GALNT1Q10472 559 aaPredicted RBP20.91■□□□□ 0.94
TRAF4-207ENST00000461195 TBL3Q12788 808 aaKnown RBP20.91■□□□□ 0.94
TRAF4-207ENST00000461195 CSTF3Q12996 717 aaKnown RBP20.91■□□□□ 0.94
TRAF4-207ENST00000461195 ERCC6LQ2NKX8 1250 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 FAM219BQ5XKK7 198 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 ZNF721Q8TF20 911 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 TMEM125Q96AQ2 219 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 ART5Q96L15 291 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 ROPN1BQ9BZX4 212 aaPredicted RBP20.91■□□□□ 0.94
TRAF4-207ENST00000461195 ROPN1Q9HAT0 212 aaPredicted RBP20.91■□□□□ 0.94
TRAF4-207ENST00000461195 MID1IP1Q9NPA3 183 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 MYOTQ9UBF9 498 aa20.91■□□□□ 0.94
TRAF4-207ENST00000461195 SVILO95425 2214 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 TMEM200CA6NKL6 621 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 PGRMC2O15173 223 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 OR10H2O60403 315 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 SSR4P51571 173 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 TDGF1P3P51864 188 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 NAGLUP54802 743 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 RNF4P78317 190 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 MAPKAPK3Q16644 382 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 CFAP157Q5JU67 520 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 NDUFAF5Q5TEU4 345 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 GALNTL5Q7Z4T8 443 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 ZNF227Q86WZ6 799 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 GBP7Q8N8V2 638 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-207ENST00000461195 FAM98AQ8NCA5 519 aaKnown RBP20.9■□□□□ 0.94
TRAF4-207ENST00000461195 OR5L2Q8NGL0 311 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 AGAP11Q8TF27 550 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 UCN3Q969E3 161 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 SENP5Q96HI0 755 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-207ENST00000461195 C12orf65Q9H3J6 166 aaKnown RBP20.9■□□□□ 0.94
TRAF4-207ENST00000461195 LIN28AQ9H9Z2 209 aaKnown RBP20.9■□□□□ 0.94
TRAF4-207ENST00000461195 OXSMQ9NWU1 459 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 MKS1Q9NXB0 559 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 LGALS13Q9UHV8 139 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 MID2Q9UJV3 735 aa20.9■□□□□ 0.94
TRAF4-207ENST00000461195 SPTBN1Q01082 2364 aaKnown RBP20.9■□□□□ 0.94
TRAF4-207ENST00000461195 H3BQF6 201 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 NME2P1O60361 137 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 SEMA7AO75326 666 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 OR2J2O76002 312 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 NME2P22392 152 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 PIK3R1P27986 724 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 HK2P52789 917 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 C16orf47Q6ZP98 133 aaPredicted RBP20.89■□□□□ 0.93
TRAF4-207ENST00000461195 DGAT2L6Q6ZPD8 337 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 FRMD7Q6ZUT3 714 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 TRABD2AQ86V40 505 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 CYP4Z2PQ8N1L4 340 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 C1orf52Q8N6N3 182 aaKnown RBP20.89■□□□□ 0.93
TRAF4-207ENST00000461195 FBXL20Q96IG2 436 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 PARD6BQ9BYG5 372 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 IQCGQ9H095 443 aaKnown RBP20.89■□□□□ 0.93
TRAF4-207ENST00000461195 TIMM22Q9Y584 194 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 ZGRF1Q86YA3 2104 aa20.89■□□□□ 0.93
TRAF4-207ENST00000461195 NBPF19A0A087WUL8 3843 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 ASPDHA6ND91 283 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 WWP2O00308 870 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 UBFD1O14562 309 aaKnown RBP20.88■□□□□ 0.93
TRAF4-207ENST00000461195 IGKV3-11P04433 115 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 SLC35E2P0CK97 266 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 MST1P26927 711 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 GALNSP34059 522 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 HTR6P50406 440 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 SPRED3Q2MJR0 410 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 LIPMQ5VYY2 423 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 GPALPP1Q8IXQ4 340 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 OR4K14Q8NGD5 310 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 CHTF18Q8WVB6 975 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 SREK1Q8WXA9 508 aaKnown RBP20.88■□□□□ 0.93
TRAF4-207ENST00000461195 ASB15Q8WXK1 588 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 RIT1Q92963 219 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 APOPT1Q96IL0 206 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 KCNA7Q96RP8 456 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 ACPTQ9BZG2 426 aa20.88■□□□□ 0.93
TRAF4-207ENST00000461195 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.88■□□□□ 0.937e-6■■■□□ 16.5
TRAF4-207ENST00000461195 KLF13Q9Y2Y9 288 aaPredicted RBP20.88■□□□□ 0.93
TRAF4-207ENST00000461195 HIVEP3Q5T1R4 2406 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 CHN1P15882 459 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 SRSF11Q05519 484 aaKnown RBP20.87■□□□□ 0.93
TRAF4-207ENST00000461195 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.87■□□□□ 0.93
TRAF4-207ENST00000461195 SRRM1Q8IYB3 904 aaKnown RBP20.87■□□□□ 0.93
TRAF4-207ENST00000461195 MREGQ8N565 214 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 BANPQ8N9N5 519 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 FRMD6Q96NE9 622 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 RASL10BQ96S79 203 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 CNPPD1Q9BV87 410 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 ERVK-11Q9UQG0 969 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 OSGIN2Q9Y236 505 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 PLLPQ9Y342 182 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 PCDHA9Q9Y5H5 950 aa20.87■□□□□ 0.93
TRAF4-207ENST00000461195 C1orf226A1L170 272 aa20.86■□□□□ 0.93
TRAF4-207ENST00000461195 SERTM1A2A2V5 107 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms