RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 HRKO00198 91 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 UBFD1O14562 309 aaKnown RBP17.38■□□□□ 0.37
USP39-209ENST00000458268 ERAL1O75616 437 aaKnown RBP17.38■□□□□ 0.37
USP39-209ENST00000458268 SLC25A12O75746 678 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 OR2J2O76002 312 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 GPR75O95800 540 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 DDAH2O95865 285 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 DEKP35659 375 aaKnown RBP17.38■□□□□ 0.37
USP39-209ENST00000458268 SSR4P51571 173 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 ERVK-8P63133 956 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 GALNT1Q10472 559 aaPredicted RBP17.38■□□□□ 0.37
USP39-209ENST00000458268 CSTF3Q12996 717 aaKnown RBP17.38■□□□□ 0.37
USP39-209ENST00000458268 PCLAFQ15004 111 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 FHL5Q5TD97 284 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 C6orf163Q5TEZ5 329 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 LIPMQ5VYY2 423 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 FRMD7Q6ZUT3 714 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 LGI4Q8N135 537 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 CYP4Z2PQ8N1L4 340 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 TMEM178AQ8NBL3 297 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 MDS2Q8NDY4 140 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 GAL3ST4Q96RP7 486 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 ACPTQ9BZG2 426 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 ROPN1BQ9BZX4 212 aaPredicted RBP17.38■□□□□ 0.37
USP39-209ENST00000458268 ROPN1Q9HAT0 212 aaPredicted RBP17.38■□□□□ 0.37
USP39-209ENST00000458268 OXSMQ9NWU1 459 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 LGALS13Q9UHV8 139 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 ERVK-19Q9WJR5 959 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 ZGRF1Q86YA3 2104 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 GUCY1B2O75343 617 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 CBX6O95503 412 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 PTGER1P34995 402 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 ACSM2AQ08AH3 577 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 TBL3Q12788 808 aaKnown RBP17.37■□□□□ 0.37
USP39-209ENST00000458268 ZNF750Q32MQ0 723 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 ACSM2BQ68CK6 577 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 SLC25A25Q6KCM7 469 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 RPUSD3Q6P087 351 aaKnown RBP17.37■□□□□ 0.37
USP39-209ENST00000458268 FAM180BQ6P0A1 224 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 IL20RBQ6UXL0 311 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 BANPQ8N9N5 519 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 ASB15Q8WXK1 588 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 SENP5Q96HI0 755 aaPredicted RBP17.37■□□□□ 0.37
USP39-209ENST00000458268 MECRQ9BV79 373 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 ADAM29Q9UKF5 820 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 PLLPQ9Y342 182 aa17.37■□□□□ 0.37
USP39-209ENST00000458268 UBR5O95071 2799 aaPredicted RBP17.37■□□□□ 0.37
USP39-209ENST00000458268 A8MVJ9 347 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 RGS16O15492 202 aaPredicted RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 PCDH7O60245 1069 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 NEURL1O76050 574 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 CRYABP02511 175 aaKnown RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 SP1P08047 785 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 HSD3B1P14060 373 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 CREB1P16220 341 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 NT5EP21589 574 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 HSD3B2P26439 372 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 RFC3P40938 356 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 HLCSP50747 726 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 GPR143P51810 404 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 HK2P52789 917 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 KCNK10P57789 538 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 DNAJB13P59910 316 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 RNF4P78317 190 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 IGLV3-21P80748 117 aaPredicted RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 UBAP2LQ14157 1087 aaKnown RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 INAQ16352 499 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 CLEC6AQ6EIG7 209 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 ST13P4Q8IZP2 240 aaPredicted RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 FAM26EQ8N5C1 309 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 FAM98AQ8NCA5 519 aaKnown RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 OR4K14Q8NGD5 310 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 TCP10LQ8TDR4 215 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 ZNF721Q8TF20 911 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 RIT1Q92963 219 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 KLHL29Q96CT2 875 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 APIPQ96GX9 242 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 ART5Q96L15 291 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 PELOQ9BRX2 385 aaKnown RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 GATA5Q9BWX5 397 aaPredicted RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 HPF1Q9NWY4 346 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 OSGIN2Q9Y236 505 aa17.36■□□□□ 0.37
USP39-209ENST00000458268 YARS2Q9Y2Z4 477 aaKnown RBP17.36■□□□□ 0.37
USP39-209ENST00000458268 ALDH3A1P30838 453 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 FEN1P39748 380 aaKnown RBP17.35■□□□□ 0.37
USP39-209ENST00000458268 SOX3P41225 446 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 XKP51811 444 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 GPR85P60893 370 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 ZNF844Q08AG5 666 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 ASPHQ12797 758 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 CEP85LQ5SZL2 805 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 GFRALQ6UXV0 394 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 RNF111Q6ZNA4 994 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 ZCCHC23Q6ZST2 131 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 MREGQ8N565 214 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 GBP7Q8N8V2 638 aaPredicted RBP17.35■□□□□ 0.37
USP39-209ENST00000458268 ST6GALNAC3Q8NDV1 305 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 AGR3Q8TD06 166 aa17.35■□□□□ 0.37
USP39-209ENST00000458268 NR4A3Q92570 626 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms