RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 METTL2AQ96IZ6 378 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 OR1F2PQ96R84 312 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 GPR87Q9BY21 358 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 REEP4Q9H6H4 257 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 WDR54Q9H977 334 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 CLK4Q9HAZ1 481 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 CPNE5Q9HCH3 593 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 MIEF1Q9NQG6 463 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 PRDM9Q9NQV7 894 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 C14orf105Q9NVL8 296 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 KCND3Q9UK17 655 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 MRPS33Q9Y291 106 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 CLDN16Q9Y5I7 305 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 KNTC1P50748 2209 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 HEATR5BQ9P2D3 2071 aa8.14□□□□□ -1.11
CLTCL1-204ENST00000458188 A0A087WV48 116 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 HRKO00198 91 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SOCS6O14544 535 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SCAMP2O15127 329 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 PRKNO60260 465 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 NME6O75414 186 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SLC22A3O75751 556 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SEC24DO94855 1032 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 CELA2AP08217 269 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 DRD2P14416 443 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 IDO1P14902 403 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 IL10P22301 178 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 GPX3P22352 226 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 PGDP52209 483 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 HSD17B7P56937 341 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 OR4D2P58180 307 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 PHC1P78364 1004 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 CHAF1BQ13112 559 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SSPNQ14714 243 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 LTB4RQ15722 352 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SMU1Q2TAY7 513 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 PDCD4Q53EL6 469 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 AGKQ53H12 422 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SFT2D3Q587I9 215 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SPANXN4Q5MJ08 99 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 CPTPQ5TA50 214 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 OR4F3Q6IEY1 312 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 FAM111BQ6SJ93 734 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 KIRREL2Q6UWL6 708 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 QSOX2Q6ZRP7 698 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 ZNF551Q7Z340 670 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 MTDHQ86UE4 582 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 ANKRD46Q86W74 232 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SCUBE1Q8IWY4 988 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 RIMKLAQ8IXN7 391 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 MIER2Q8N344 545 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 ZNF843Q8N446 348 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 ZNF321PQ8N8H1 164 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SIMC1Q8NDZ2 872 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 PLPP5Q8NEB5 264 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SNIP1Q8TAD8 396 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 VPS33AQ96AX1 596 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 CNRIP1Q96F85 164 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 MAGED4Q96JG8 741 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 BBS4Q96RK4 519 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 CCNL2Q96S94 520 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SIKE1Q9BRV8 207 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 CLMPQ9H6B4 373 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 ANKRA2Q9H9E1 313 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SLAMF7Q9NQ25 335 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SLC35C2Q9NQQ7 365 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 ASIC5Q9NY37 505 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 CCDC167Q9P0B6 97 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 ARMCX1Q9P291 453 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 NXT1Q9UKK6 140 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 PADI2Q9Y2J8 665 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 HS3ST3B1Q9Y662 390 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 ZNF780BQ9Y6R6 833 aa8.13□□□□□ -1.11
CLTCL1-204ENST00000458188 SCN3AQ9NY46 2000 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 IGKV3D-11A0A0A0MRZ8 115 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 LOC100653049A0A140TA62 436 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 TCRBV16S1A1N1A0A5B0 115 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 FCHO1O14526 889 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 RRP8O43159 456 aaKnown RBP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 OR10H2O60403 315 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 KRT34O76011 436 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 CPSF4O95639 269 aaKnown RBP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 FAM107AO95990 144 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 ABCB1P08183 1280 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 CT62P0C5K7 136 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 CPMP14384 443 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 PORP16435 677 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 CSNK2A2P19784 350 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 PRPS1L1P21108 318 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 NT5EP21589 574 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 MMP11P24347 488 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 HPCAL1P37235 193 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 ASMTP46597 345 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 ZFP36L2P47974 494 aaKnown RBP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 ST13P50502 369 aaKnown RBP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 NCBP2P52298 156 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 STX1BP61266 288 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 MRPS35P82673 323 aaKnown RBP8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 KCNC4Q03721 635 aa8.12□□□□□ -1.11
CLTCL1-204ENST00000458188 ATP1A4Q13733 1029 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms