RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 LRRC1Q9BTT6 524 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 CNPPD1Q9BV87 410 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 TTTY12Q9BZ98 90 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 TP63Q9H3D4 680 aaPredicted RBP14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 IPPKQ9H8X2 491 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 SACM1LQ9NTJ5 587 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 LYARQ9NX58 379 aaKnown RBP14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 NINJ2Q9NZG7 142 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 TNPO3Q9Y5L0 923 aaKnown RBP14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 IKBKGQ9Y6K9 419 aa14.58□□□□□ -0.08
CHCHD3-204ENST00000457942 DNAJC13O75165 2243 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 CCDC189A1A4V9 331 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 PINLYPA6NC86 204 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 LRRC14BA6NHZ5 514 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 FAM90A27PA6NNH2 459 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 PRKRAO75569 313 aaKnown RBP14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 ACSL3O95573 720 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 INHBAP08476 426 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 ALOX15P16050 662 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 PTX3P26022 381 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 HNRNPH2P55795 449 aaKnown RBP14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 WHAMMP3Q1A5X7 153 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 C18orf63Q68DL7 685 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 TMEM211Q6ICI0 200 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 RGS9BPQ6ZS82 235 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 ZCCHC7Q8N3Z6 543 aaKnown RBP14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 DOK4Q8TEW6 326 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 ZNF721Q8TF20 911 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 TANKQ92844 425 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 SENP5Q96HI0 755 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 SGCZQ96LD1 299 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 FAM173AQ9BQD7 235 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 ACSS3Q9H6R3 686 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 WDR41Q9HAD4 459 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 ZDHHC18Q9NUE0 388 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 ATG4BQ9Y4P1 393 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 NAV3Q8IVL0 2385 aa14.57□□□□□ -0.08
CHCHD3-204ENST00000457942 IQANK1A0A1B0GTG1 560 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 GLOD5A6NK44 160 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 NPIPA2E9PIF3 369 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 NPIPA3F8WFD2 350 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 ADAM10O14672 748 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 UGDHO60701 494 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 SIX3O95343 332 aaPredicted RBP14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 ALDOAP04075 364 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 NR2F6P10588 404 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 CNR1P21554 472 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 DNASE1L1P49184 302 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 CCNG1P51959 295 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 HERVK_113P63132 956 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 ERVK-8P63133 956 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 PCDH1Q08174 1060 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 BIKQ13323 160 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 PCBP2Q15366 365 aaKnown RBP eCLIP14.56□□□□□ -0.082e-6■■□□□ 13
CHCHD3-204ENST00000457942 NDUFAF5Q5TEU4 345 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 TTC19Q6DKK2 380 aaPredicted RBP14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 SLC29A4Q7RTT9 530 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 NUDT13Q86X67 352 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 PTGR2Q8N8N7 351 aaPredicted RBP14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 GOLM1Q8NBJ4 401 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 NOA1Q8NC60 698 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 OR5M3Q8NGP4 307 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 SMC6Q96SB8 1091 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 PELOQ9BRX2 385 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 ERVK-6Q9BXR3 956 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 ENKD1Q9H0I2 346 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 LDAHQ9H6V9 325 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 EXO5Q9H790 373 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 ERVK-19Q9WJR5 959 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 RNF11Q9Y3C5 154 aa14.56□□□□□ -0.08
CHCHD3-204ENST00000457942 SPG11Q96JI7 2443 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 A0A1B0GTL3 188 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 ATP6AP2A0A1C7CYW4 349 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 HMX2A2RU54 273 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 NKX2-6A6NCS4 301 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 H0YIV9 168 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 SMIM24O75264 130 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 EEDO75530 441 aaKnown RBP14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 ATP6AP2O75787 350 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 CLDN9O95484 217 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 CCL3P10147 92 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 MAGEA5P43359 124 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 NEK2P51955 445 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 IGLV3-21P80748 117 aaPredicted RBP14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 ZNF267Q14586 743 aaPredicted RBP14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 TECRLQ5HYJ1 363 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 RNF111Q6ZNA4 994 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 C9orf40Q8IXQ3 194 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 ST13P4Q8IZP2 240 aaPredicted RBP14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 FAM109AQ8N4B1 249 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 FAM13CQ8NE31 585 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 NUBPLQ8TB37 319 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 ASB5Q8WWX0 329 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 IFT81Q8WYA0 676 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 RND1Q92730 232 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 PHF21BQ96EK2 531 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 FBXL20Q96IG2 436 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 CDK15Q96Q40 435 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 CDC42EP4Q9H3Q1 356 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms