RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PKP4Q99569 1192 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 B3GNT2Q9NY97 397 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 A0A1W2PS29 197 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 RAG2P55895 527 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 KCNJ11Q14654 390 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 C11orf91Q3C1V1 193 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SHFQ7M4L6 423 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 KBTBD6Q86V97 674 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 NPAS3Q8IXF0 933 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PGBD3Q8N328 593 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 DNAAF1Q8NEP3 725 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ZFAND1Q8TCF1 268 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 GTPBP3Q969Y2 492 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CDK15Q96Q40 435 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ACO2Q99798 780 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PSD2Q9BQI7 771 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF700Q9H0M5 742 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TREM1Q9NP99 234 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CHRNA9Q9UGM1 479 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SLC7A11Q9UPY5 501 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ICKQ9UPZ9 632 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 BCORQ6W2J9 1755 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 KLRC4O43908 158 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 LALBAP00709 142 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ALPPL2P10696 532 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CD44P16070 742 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 THBS2P35442 1172 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 RGS19P49795 217 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 IDH3AP50213 366 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ARF5P84085 180 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 MOGSQ13724 837 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PDE12Q6L8Q7 609 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 KIAA1324Q6UXG2 1013 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SLC16A9Q7RTY1 509 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ABHD12BQ7Z5M8 362 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PCDH20Q8N6Y1 951 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CELF1Q92879 486 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TSSK3Q96PN8 268 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CDT1Q9H211 546 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 BRD7Q9NPI1 651 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ENAMQ9NRM1 1142 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TNRC6AQ8NDV7 1962 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PGLSO95336 258 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ANXA7P20073 488 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ATXN1P54253 815 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 HENMT1Q5T8I9 393 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 COL13A1Q5TAT6 717 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 EEPD1Q7L9B9 569 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM200AQ86VY9 491 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 RSPRY1Q96DX4 576 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 RTP4Q96DX8 246 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ORAI2Q96SN7 254 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 NPLQ9BXD5 320 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SMOC2Q9H3U7 446 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 BCS1LQ9Y276 419 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CRYBG1Q9Y4K1 1723 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 NEMP2A6NFY4 417 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 FAM170BA6NMN3 283 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 C9IYK1 514 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 NRP1O14786 923 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 BEST1O76090 585 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ITPKAP23677 461 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SLC1A3P43003 542 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 AFF3P51826 1226 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 INCA1Q0VD86 236 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 FGL2Q14314 439 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 BAK1Q16611 211 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 AARDQ4LEZ3 155 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ELP2Q6IA86 826 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CATSPERGQ6ZRH7 1159 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 IQCF2Q8IXL9 164 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CPA6Q8N4T0 437 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TECTBQ96PL2 329 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 JAM3Q9BX67 310 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 DNAJC5Q9H3Z4 198 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CTPS2Q9NRF8 586 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ENPP5Q9UJA9 477 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SLC45A1Q9Y2W3 748 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TLN2Q9Y4G6 2542 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 OR51F1A6NGY5 319 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 FKTNO75072 461 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ADAM23O75077 832 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 DFFBO76075 338 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CDK1P06493 297 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 PROS1P07225 676 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SNHG28P0DPA3 235 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RFC2P35250 354 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 EPHA5P54756 1037 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 UBE2MP61081 183 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 NPRL3Q12980 569 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF460Q14592 562 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SPCS2Q15005 226 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RAET1GQ6H3X3 334 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RNF44Q7L0R7 432 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 KLHDC1Q8N7A1 406 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CHDHQ8NE62 594 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 GPX8Q8TED1 209 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CHRDQ9H2X0 955 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CRLF2Q9HC73 371 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ABT1Q9ULW3 272 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms