RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FAM45BPQ6NSW5 357 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 XKRXQ6PP77 449 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 FKBP9P1Q75LS8 142 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ABHD13Q7L211 337 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 MDGA2Q7Z553 956 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CLNKQ7Z7G1 428 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ZC3HC1Q86WB0 502 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 SIAH3Q8IW03 269 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CHERPQ8IWX8 916 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 LILRA2Q8N149 483 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PDIK1LQ8N165 341 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CA13Q8N1Q1 262 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF808Q8N4W9 903 aaPredicted RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 OR52N2Q8NGI0 321 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 NT5CQ8TCD5 201 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM45AQ8TCE6 357 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 DOK4Q8TEW6 326 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 AGAP11Q8TF27 550 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PDLIM5Q96HC4 596 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 KIRREL1Q96J84 757 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 OR1F2PQ96R84 312 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 EGFL8Q99944 293 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 AIF1LQ9BQI0 150 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 SARGQ9BW04 601 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 DEFB126Q9BYW3 111 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 DEFB127Q9H1M4 99 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CAB39LQ9H9S4 337 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TNFRSF12AQ9NP84 129 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 SMYD2Q9NRG4 433 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 MOCS1Q9NZB8 636 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 MYOTQ9UBF9 498 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ADGRE2Q9UHX3 823 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF223Q9UK11 482 aaPredicted RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 FBXW2Q9UKT8 454 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF490Q9ULM2 529 aaPredicted RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PLA2G2DQ9UNK4 145 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF835Q9Y2P0 537 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 MTO1Q9Y2Z2 717 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 MEMO1Q9Y316 297 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 SNX24Q9Y343 169 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ASB1Q9Y576 335 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CLDN16Q9Y5I7 305 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 KLF2Q9Y5W3 355 aaPredicted RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 KCNE2Q9Y6J6 123 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 KIAA1549Q9HCM3 1950 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 MYO9AB2RTY4 2548 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 IGKV3D-11A0A0A0MRZ8 115 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PINLYPA6NC86 204 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 LRIT2A6NDA9 550 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PABPN1LA6NDY0 278 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 URADA6NGE7 173 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 SAGE2PA6NJ88 616 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 CXorf49A8MYA2 514 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 G3V3Y1 287 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PSMD12O00232 456 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 WWP2O00308 870 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 DVL2O14641 736 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ADAM10O14672 748 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 CLGNO14967 610 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PHGDHO43175 533 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ERI3O43414 337 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PEX1O43933 1283 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 NME2P1O60361 137 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 LDB3O75112 727 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ITGA10O75578 1167 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 OR2J2O76002 312 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 CLDN14O95500 239 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 TBX6O95947 436 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 SERPINA6P08185 405 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 CYC1P08574 325 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ENO2P09104 434 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 C1GALT1C1LP0DN25 315 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 RNH1P13489 461 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 CPEP16870 476 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF37AP17032 561 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 IL10P22301 178 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 JAK1P23458 1154 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ELAVL4P26378 380 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 SSTR1P30872 391 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 HNRNPH1P31943 449 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 AHRP35869 848 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 RPL21P46778 160 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 KCNC1P48547 511 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 HSPA7P48741 367 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 MEOX1P50221 254 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 HLCSP50747 726 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 CLCN2P51788 898 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 GPR143P51810 404 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PLA2G16P53816 162 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 DR1Q01658 176 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ID2Q02363 134 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC13A2Q13183 592 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 MORF4L2Q15014 288 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PPP1R3AQ16821 1122 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 STEAP4Q687X5 459 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 IL20RBQ6UXL0 311 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 TMIGD1Q6UXZ0 262 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 Q6ZPB1 254 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 QSOX2Q6ZRP7 698 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms