RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CASP9P55211 416 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 KRR1Q13601 381 aaKnown RBP11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 ENPP2Q13822 863 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 ZIC1Q15915 447 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 PERM1Q5SV97 790 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 DCST1Q5T197 706 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 FAM46CQ5VWP2 391 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 HEATR4Q86WZ0 1026 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 CADM3Q8N126 398 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 TBC1D19Q8N5T2 526 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 LMNTD1Q8N9Z9 388 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 BBS10Q8TAM1 723 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 CREB3L4Q8TEY5 395 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 PAWRQ96IZ0 340 aaKnown RBP11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 F2RL3Q96RI0 385 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 MGLLQ99685 303 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 SORBS1Q9BX66 1292 aaKnown RBP11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 TMEM121BQ9BXQ6 578 aaPredicted RBP11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 CUEDC1Q9NWM3 386 aaPredicted RBP11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 SCHIP1Q9P0W5 487 aaPredicted RBP11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 P2RX2Q9UBL9 471 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 DOLKQ9UPQ8 538 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 TRAPPC4Q9Y296 219 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 CCDC88CQ9P219 2028 aa11.87□□□□□ -0.51
ECHDC1-209ENST00000454591 TMEM221A6NGB7 291 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 AQP9O43315 295 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TMPRSS11DO60235 418 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 SEMA7AO75326 666 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 PTTG1O95997 202 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TP53P04637 393 aaPredicted RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 CSTF2P33240 577 aaKnown RBP eCLIP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TRIM23P36406 574 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TGFBR1P36897 503 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 CCT3P49368 545 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 ANXA11P50995 505 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 CSNK1G2P78368 415 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 INAVAQ3KP66 663 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TPRG1LQ5T0D9 272 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 MFSD4BQ5TF39 518 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 MRM1Q6IN84 353 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 PGBD2Q6P3X8 592 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 CCDC190Q86UF4 302 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 RAB42Q8N4Z0 105 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 FAM26EQ8N5C1 309 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 ZNF784Q8NCA9 323 aaPredicted RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 OR8J1Q8NGP2 316 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 KLHL6Q8WZ60 621 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 FGF11Q92914 225 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 GTPBP3Q969Y2 492 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 MOAP1Q96BY2 351 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 ASB16Q96NS5 453 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TRNT1Q96Q11 434 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TIMM29Q9BSF4 260 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 SPATA5L1Q9BVQ7 753 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 OR51E2Q9H255 320 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 SERHL2Q9H4I8 314 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 RMI1Q9H9A7 625 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 PRSS16Q9NQE7 514 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 MRPS18AQ9NVS2 196 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 ANKMY1Q9P2S6 941 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 ITGB1BP2Q9UKP3 347 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 RPL36Q9Y3U8 105 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 CKAP5Q14008 2032 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 LOC110117498-PIK3R3F6TDL0 507 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 FUT4P22083 530 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 S100A5P33763 92 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TSFMP43897 325 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 EFNB1P98172 346 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 PRDX1Q06830 199 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 GANABQ14697 944 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 SEC23BQ15437 767 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 WSCD2Q2TBF2 565 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TMEM240Q5SV17 173 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 OR4C11Q6IEV9 310 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TNFAIP8L2Q6P589 184 aaPredicted RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 MRGPREQ86SM8 312 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TRIM69Q86WT6 500 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 OR2L8Q8NGY9 312 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 SUSD6Q92537 303 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 PIK3R3Q92569 461 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 SMARCD2Q92925 531 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 ARMC5Q96C12 935 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 AMDHD1Q96NU7 426 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 OPALINQ96PE5 141 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 POLDIP3Q9BY77 421 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 ARMC7Q9H6L4 198 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 C3orf14Q9HBI5 128 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 A4GNTQ9UNA3 340 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 TMEM98Q9Y2Y6 226 aa11.86□□□□□ -0.51
ECHDC1-209ENST00000454591 HEATR5BQ9P2D3 2071 aa11.85□□□□□ -0.51
ECHDC1-209ENST00000454591 C2orf16Q68DN1 1984 aa11.85□□□□□ -0.51
ECHDC1-209ENST00000454591 PRAMEF27A3QJZ7 478 aa11.85□□□□□ -0.51
ECHDC1-209ENST00000454591 LINC01553A4QN01 128 aa11.85□□□□□ -0.51
ECHDC1-209ENST00000454591 ANHXE9PGG2 379 aa11.85□□□□□ -0.51
ECHDC1-209ENST00000454591 SYT5O00445 386 aa11.85□□□□□ -0.51
ECHDC1-209ENST00000454591 ARHGAP33O14559 1287 aa11.85□□□□□ -0.51
ECHDC1-209ENST00000454591 CASC3O15234 703 aaKnown RBP11.85□□□□□ -0.51
ECHDC1-209ENST00000454591 PRICKLE3O43900 615 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms