RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LGSNQ5TDP6 509 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 C3P1Q6ZMU1 363 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 GK5Q6ZS86 529 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 TICAM1Q8IUC6 712 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 CHERPQ8IWX8 916 aaKnown RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 ST13P4Q8IZP2 240 aaPredicted RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 GOLM1Q8NBJ4 401 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 OR2M7Q8NG81 312 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 OR52N2Q8NGI0 321 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 UHMK1Q8TAS1 419 aaKnown RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 SERPINI1Q99574 410 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 MRPL57Q9BQC6 102 aaKnown RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 PELOQ9BRX2 385 aaKnown RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 DDX31Q9H8H2 851 aaKnown RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 DEPPQ9NTK1 212 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 XPR1Q9UBH6 696 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 ZNF180Q9UJW8 692 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 PPT2Q9UMR5 302 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 FREM3P0C091 2139 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 DCHS2Q6V1P9 2916 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 A0A0A6YYD5 115 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 IQANK1A0A1B0GTG1 560 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 GLOD5A6NK44 160 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 TRIM49D1C9J1S8 452 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 STX16-NPEPL1H3BU86 382 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 OR7A17O14581 309 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 STX16O14662 325 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 PRKRAO75569 313 aaKnown RBP11.93□□□□□ -0.5
CHD3-206ENST00000452447 CLDN14O95500 239 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 GPR75O95800 540 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 P04436 131 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 NR2F6P10588 404 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 IFT88Q13099 833 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 C10orf62Q5T681 223 aaPredicted RBP11.93□□□□□ -0.5
CHD3-206ENST00000452447 FRG2Q64ET8 278 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 RGS9BPQ6ZS82 235 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 FAM47EQ6ZV65 393 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 FGD2Q7Z6J4 655 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 CD163Q86VB7 1156 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 SLC22A16Q86VW1 577 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 LURAP1LQ8IV03 231 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 MCEMP1Q8IX19 187 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 OR52B6Q8NGF0 335 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 NUBPLQ8TB37 319 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 FAM57AQ8TBR7 257 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 SLC22A8Q8TCC7 542 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 PHF10Q8WUB8 498 aaKnown RBP11.93□□□□□ -0.5
CHD3-206ENST00000452447 RIT1Q92963 219 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 FBXL20Q96IG2 436 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 FRG2BQ96QU4 278 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 FAM173AQ9BQD7 235 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 NTMT1Q9BV86 223 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 CNPPD1Q9BV87 410 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 ZNF717Q9BY31 904 aaPredicted RBP11.93□□□□□ -0.5
CHD3-206ENST00000452447 DEFB127Q9H1M4 99 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 MRPL46Q9H2W6 279 aaKnown RBP11.93□□□□□ -0.5
CHD3-206ENST00000452447 SACM1LQ9NTJ5 587 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 ASB4Q9Y574 426 aa11.93□□□□□ -0.5
CHD3-206ENST00000452447 PHF3Q92576 2039 aaKnown RBP11.93□□□□□ -0.5
CHD3-206ENST00000452447 EXOC1LA0A1B0GW35 172 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 A0A1W2PR48 441 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 FAM166BA8MTA8 275 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 G3V3Y1 287 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 TMPRSS11DO60235 418 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 SEMA3DO95025 777 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 GBAP04062 536 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 IGKV3-11P04433 115 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 COX6B1P14854 86 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 CNR1P21554 472 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 ECHS1P30084 290 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 HERVK_113P63132 956 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 ERVK-8P63133 956 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 PIGGQ5H8A4 983 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 NDUFAF5Q5TEU4 345 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 MRM1Q6IN84 353 aaKnown RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 SLC29A4Q7RTT9 530 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 MILR1Q7Z6M3 343 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 C9orf40Q8IXQ3 194 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 KIF18AQ8NI77 898 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 DCAKDQ8WVC6 231 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 GAL3ST4Q96RP7 486 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 ERVK-6Q9BXR3 956 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 ELOVL6Q9H5J4 265 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 SEMA4BQ9NPR2 832 aaPredicted RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 COQ3Q9NZJ6 369 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 PCTPQ9UKL6 214 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 ERVK-19Q9WJR5 959 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 TACC2O95359 2948 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 PINLYPA6NC86 204 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 WASHC1A8K0Z3 465 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 HRKO00198 91 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 ZNF354AO60765 605 aaPredicted RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 AIFM1O95831 613 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 SNRPB2P08579 225 aaKnown RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 SNRPAP09012 282 aaKnown RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 PRF1P14222 555 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 TRAF3Q13114 568 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 ZNF267Q14586 743 aaPredicted RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 TEX35Q5T0J7 233 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms