RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TMEM151BQ8IW70 566 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 CPSF7Q8N684 471 aaKnown RBP10.86□□□□□ -0.67
SCN9A-204ENST00000452182 KRTCAP2Q8N6L1 136 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 ADAMTS17Q8TE56 1095 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 GFM2Q969S9 779 aaKnown RBP10.86□□□□□ -0.67
SCN9A-204ENST00000452182 PPCDCQ96CD2 204 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 COQ8BQ96D53 544 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 ZNF681Q96N22 645 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 CATSPER2Q96P56 530 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 IP6K3Q96PC2 410 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 CCNL2Q96S94 520 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-204ENST00000452182 PELOQ9BRX2 385 aaKnown RBP10.86□□□□□ -0.67
SCN9A-204ENST00000452182 RABEP2Q9H5N1 569 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 CLMPQ9H6B4 373 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 SLC35C2Q9NQQ7 365 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 ATAD3AQ9NVI7 634 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 C19orf25Q9UFG5 118 aaPredicted RBP10.86□□□□□ -0.67
SCN9A-204ENST00000452182 COPG1Q9Y678 874 aaKnown RBP10.86□□□□□ -0.67
SCN9A-204ENST00000452182 ZFHX4Q86UP3 3567 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 CROCCQ5TZA2 2017 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 WASHC1A8K0Z3 465 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 TGFBR3LH3BV60 316 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 AKAP10O43572 662 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 SLC22A3O75751 556 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 SLC35E2P0CK97 266 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 CSNK2A2P19784 350 aaPredicted RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 NCF2P19878 526 aaPredicted RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 GPX3P22352 226 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 ADSLP30566 484 aaPredicted RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 FRKP42685 505 aaPredicted RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 XKP51811 444 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 UFM1P61960 85 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 GUCA2AQ02747 115 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 SRSF11Q05519 484 aaKnown RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 SF3A3Q12874 501 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 CPTPQ5TA50 214 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 GKAP1Q5VSY0 366 aaPredicted RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 FAM69BQ5VUD6 431 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 VASH2Q86V25 355 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 PROSER1Q86XN7 944 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 RAB43Q86YS6 212 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 ST13P4Q8IZP2 240 aaPredicted RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 ANKS4BQ8N8V4 417 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 OR8J2Q8NGG1 315 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 TSLPQ969D9 159 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 KLHL29Q96CT2 875 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 CNRIP1Q96F85 164 aaPredicted RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 NAF1Q96HR8 494 aaKnown RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 VPS50Q96JG6 964 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 MARK4Q96L34 752 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 TEX37Q96LM6 180 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 ALOXE3Q9BYJ1 711 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 GIMAP4Q9NUV9 329 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 C5AR2Q9P296 337 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 ARL2BPQ9Y2Y0 163 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 HS3ST3B1Q9Y662 390 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 MRPS18BQ9Y676 258 aaKnown RBP10.85□□□□□ -0.67
SCN9A-204ENST00000452182 ZNF780BQ9Y6R6 833 aa10.85□□□□□ -0.67
SCN9A-204ENST00000452182 DMXL2Q8TDJ6 3036 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 MYO1GB0I1T2 1018 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 SLC22A2O15244 555 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 CCDC22O60826 627 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ERAL1O75616 437 aaKnown RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ATP1B1P05026 303 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 CPMP14384 443 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 COX7A2P14406 83 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 PORP16435 677 aaPredicted RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 MPIP34949 423 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 STT3AP46977 705 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 PLIN5Q00G26 463 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 IL10RAQ13651 578 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 TERF2Q15554 542 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 PPP1R32Q7Z5V6 425 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ANKRD37Q7Z713 158 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 SPACA3Q8IXA5 215 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 OR4N5Q8IXE1 308 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 KDF1Q8NAX2 398 aaPredicted RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 OR7A2PQ8NGA2 310 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 EXOSC8Q96B26 276 aaKnown RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 RBM18Q96H35 190 aaKnown RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ZBTB18Q99592 522 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 BHLHE41Q9C0J9 482 aaPredicted RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 SAR1AQ9NR31 198 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ACSS1Q9NUB1 689 aaPredicted RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 SH3BP4Q9P0V3 963 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 G3BP2Q9UN86 482 aaKnown RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ENTPD4Q9Y227 616 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 CELSR3Q9NYQ7 3312 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 A0A087WV48 116 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 FAM234BA2RU67 622 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ZNF891A8MT65 544 aaPredicted RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 SOCS6O14544 535 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 SLITRK5O94991 958 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 IL6P05231 212 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 LAMP1P11279 417 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 IL12AP29459 219 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 KIR3DL1P43629 444 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ZFP36L2P47974 494 aaKnown RBP10.84□□□□□ -0.67
SCN9A-204ENST00000452182 ID2Q02363 134 aa10.84□□□□□ -0.67
SCN9A-204ENST00000452182 RCAN2Q14206 197 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms