RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SPPL2BQ8TCT7 592 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF606Q8WXB4 792 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FBXW5Q969U6 566 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RTP4Q96DX8 246 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PGLYRP2Q96PD5 576 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ACOX2Q99424 681 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PKMYT1Q99640 499 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TGIF2Q9GZN2 237 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ENKD1Q9H0I2 346 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 KCNH6Q9H252 994 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ASB7Q9H672 318 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PARD6AQ9NPB6 346 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF302Q9NR11 478 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MMP26Q9NRE1 261 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TXNL4BQ9NX01 149 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 PURGQ9UJV8 347 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 ELF5Q9UKW6 265 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 NENFQ9UMX5 172 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 C14orf166Q9Y224 244 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 FAM50BQ9Y247 325 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PCDHA10Q9Y5I2 948 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CLCA3PQ9Y6N3 262 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 NUP188Q5SRE5 1749 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZFHX3Q15911 3703 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MYOCOSA0A1B0GUC4 107 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 A0A1B0GV72 72 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 C20orf202A1L168 122 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TTC24A2A3L6 582 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 RFPL4AA6NLU0 287 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF705FA8MVS1 300 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 RFPL4AL1F8VTS6 287 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM189-UBE2V1I3L0A0 370 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 J3KR12 359 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 K7ERQ8 282 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 NDUFS8O00217 210 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ARHGAP33O14559 1287 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ACOT8O14734 319 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SYT7O43581 403 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ATG13O75143 517 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 UBXN7O94888 489 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 DIRAS1O95057 198 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RAB40ALP0C0E4 278 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF705DP0CH99 300 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF705BP0CI00 300 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 AKAIN1P0CW23 69 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 C1GALT1C1LP0DN25 315 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC2A1P11166 492 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PRF1P14222 555 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PKMP14618 531 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 NCK1P16333 377 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM11P17152 192 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PSMB4P28070 264 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PRDX5P30044 214 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GDI1P31150 447 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GABRA5P31644 462 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CAMLGP49069 296 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 WNT4P56705 351 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ACSM2AQ08AH3 577 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF273Q14593 569 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC17A1Q14916 467 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PDIA6Q15084 440 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TAF13Q15543 124 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 UPP1Q16831 310 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 QRICH1Q2TAL8 776 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 HECTD2Q5U5R9 776 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CES4AQ5XG92 561 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ACSM2BQ68CK6 577 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GLT8D1Q68CQ7 371 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FSTL4Q6MZW2 842 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM65Q6PI78 240 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM205Q6UW68 189 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZPBP2Q6X784 338 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FAM196AQ6ZSG2 479 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 VN1R5Q7Z5H4 357 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 COMMD2Q86X83 199 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MRPL41Q8IXM3 137 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 L3MBTL4Q8NA19 623 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SYT14Q8NB59 555 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 BVESQ8NE79 360 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 OR6C4Q8NGE1 309 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 OR52H1Q8NGJ2 320 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RAB40AQ8WXH6 277 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 OSTF1Q92882 214 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM143Q96AN5 459 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM18Q96B42 140 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RGMAQ96B86 450 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZBTB8AQ96BR9 441 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MFSD3Q96ES6 412 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MED8Q96G25 268 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CDKN2AIPNLQ96HQ2 116 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 KREMEN1Q96MU8 473 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CSPG4P5Q96PW8 444 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CDK15Q96Q40 435 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CLCC1Q96S66 551 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FAM83CQ9BQN1 747 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM175Q9BSA9 504 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TSSK6Q9BXA6 273 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF341Q9BYN7 854 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PKIBQ9C010 78 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM134Q9H6X4 195 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms