RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 EEF1A2Q05639 463 aaKnown RBP13.44□□□□□ -0.26
USP39-207ENST00000450066 DUSP2Q05923 314 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 NDUFA9Q16795 377 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 AMZ1Q400G9 498 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 TCTE1Q5JU00 501 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 BHLHB9Q6PI77 547 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 WDR74Q6RFH5 385 aaPredicted RBP13.44□□□□□ -0.26
USP39-207ENST00000450066 CEACAM20Q6UY09 585 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 CBLL1Q75N03 491 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 SLC30A8Q8IWU4 369 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 CA13Q8N1Q1 262 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 Q8N9G6 341 aaPredicted RBP13.44□□□□□ -0.26
USP39-207ENST00000450066 OR4K14Q8NGD5 310 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 SFXN5Q8TD22 340 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 MOAP1Q96BY2 351 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 ASPSCR1Q9BZE9 553 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 GAREM1Q9H706 876 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 SEMA5BQ9P283 1151 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 KLHL3Q9UH77 587 aa13.44□□□□□ -0.26
USP39-207ENST00000450066 ARID1BQ8NFD5 2236 aaPredicted RBP13.44□□□□□ -0.26
USP39-207ENST00000450066 WDR87Q6ZQQ6 2873 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 A0A1W2PS29 197 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 SGK494L7N484 410 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 CYR61O00622 381 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 CLOCKO15516 846 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 MT-ND1P03886 318 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 ARAFP10398 606 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 MYF5P13349 255 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 ZNF26P17031 533 aaPredicted RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 HSD11B2P80365 405 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 CDK6Q00534 326 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 TP53BP2Q13625 1128 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 SCARB2Q14108 478 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 FAM53BQ14153 422 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 INTS11Q5TA45 600 aaKnown RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 GARNL3Q5VVW2 1013 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 USP53Q70EK8 1073 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 EIF3MQ7L2H7 374 aaKnown RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 SPRED1Q7Z699 444 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 LRRC25Q8N386 305 aaPredicted RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 ZBTB44Q8NCP5 570 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 OR5T3Q8NGG3 340 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 ZNF570Q96NI8 536 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 CIB1Q99828 191 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 BDH2Q9BUT1 245 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 ZCCHC3Q9NUD5 404 aaKnown RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 THUMPD1Q9NXG2 353 aaKnown RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 FITM1A5D6W6 292 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 H0YJX3 145 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 DEAF1O75398 565 aaPredicted RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 GCM2O75603 506 aaPredicted RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 ZNF682O95780 498 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 CSF2RBP32927 897 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 XKP51811 444 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 SIM1P81133 766 aaPredicted RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 ELOAQ14241 798 aaKnown RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 NR0B2Q15466 257 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 CCDC80Q76M96 950 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 HORMAD2Q8N7B1 307 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 FAM181AQ8N9Y4 354 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 TTC29Q8NA56 475 aaPredicted RBP13.43□□□□□ -0.26
USP39-207ENST00000450066 OR9A4Q8NGU2 314 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 TANKQ92844 425 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 CCDC74AQ96AQ1 378 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 TBC1D20Q96BZ9 403 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 COQ10BQ9H8M1 238 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 A4GALTQ9NPC4 353 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 ENAMQ9NRM1 1142 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 SLC6A14Q9UN76 642 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 LRCH1Q9Y2L9 728 aa13.43□□□□□ -0.26
USP39-207ENST00000450066 HYKKA2RU49 373 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 RDH16O75452 317 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 PRSS23O95084 383 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 FHP07954 510 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 SP9P0CG40 484 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 CRYBA2P53672 197 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 EMP3P54852 163 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 RAB38P57729 211 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 RPS26P62854 115 aaKnown RBP13.42□□□□□ -0.26
USP39-207ENST00000450066 PRR5P85299 388 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 INAVAQ3KP66 663 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.42□□□□□ -0.26
USP39-207ENST00000450066 TNFAIP8L2Q6P589 184 aaPredicted RBP13.42□□□□□ -0.26
USP39-207ENST00000450066 SLC23A3Q6PIS1 610 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 PRSS42Q7Z5A4 293 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 GALNT10Q86SR1 603 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 ZC3H7AQ8IWR0 971 aaKnown RBP13.42□□□□□ -0.26
USP39-207ENST00000450066 OR56A1Q8NGH5 318 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 NFKBIDQ8NI38 313 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 N4BP2L2Q92802 583 aaPredicted RBP13.42□□□□□ -0.26
USP39-207ENST00000450066 ELP4Q96EB1 424 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 BTBD9Q96Q07 612 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 ADPRHL2Q9NX46 363 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 PCDH15Q96QU1 1955 aa13.42□□□□□ -0.26
USP39-207ENST00000450066 LY6G6EA0A0G2JKS1 128 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 PATE3B3GLJ2 98 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 HMGN4O00479 90 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 EMC8O43402 210 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 FOXS1O43638 330 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SIGLEC6O43699 453 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms