RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 NTSP30990 170 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 VIPR1P32241 457 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 GPR4P46093 362 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 AP1S1P61966 158 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 RPS25P62851 125 aaKnown RBP11.83□□□□□ -0.51
UBE3B-204ENST00000449510 FCN2Q15485 313 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 DUSP7Q16829 419 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 TOR1AIP1Q5JTV8 583 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 FCRLBQ6BAA4 426 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 C17orf64Q86WR6 236 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 LACC1Q8IV20 430 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 FAM20CQ8IXL6 584 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 KRT78Q8N1N4 520 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 GTF3C2Q8WUA4 911 aaPredicted RBP11.83□□□□□ -0.51
UBE3B-204ENST00000449510 USP7Q93009 1102 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 ARSGQ96EG1 525 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 MGME1Q9BQP7 344 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 SUV39H2Q9H5I1 410 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 CSNK1G1Q9HCP0 422 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 STARD7Q9NQZ5 370 aa11.83□□□□□ -0.51
UBE3B-204ENST00000449510 L7N2F9 121 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 ATG13O75143 517 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 FGBP02675 491 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 ATF6P18850 670 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 P2RX3P56373 397 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 LYPLAL1Q5VWZ2 237 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 MTSS1LQ765P7 747 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 LRRC70Q7Z2Q7 622 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 OR7G3Q8NG95 312 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 POP5Q969H6 163 aaKnown RBP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 RFT1Q96AA3 541 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 TMEM19Q96HH6 336 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 QRSL1Q9H0R6 528 aaKnown RBP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 OR51I1Q9H343 314 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 REEP4Q9H6H4 257 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 OR6C2Q9NZP2 312 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 SRRDQ9UH36 339 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 NDRG2Q9UN36 371 aaKnown RBP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 ENPP4Q9Y6X5 453 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 NPIPB15A6NHN6 443 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 FMO6PO60774 539 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 RAB36O95755 333 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 SRPRAP08240 638 aaKnown RBP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 CKBP12277 381 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 NAT1P18440 290 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF763Q0D2J5 394 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 FAM209AQ5JX71 171 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 SERPINA11Q86U17 422 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 LSRQ86X29 649 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF740Q8NDX6 193 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 OR8K3Q8NH51 312 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 SCRN2Q96FV2 425 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 FUBP3Q96I24 572 aaKnown RBP eCLIP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 UROC1Q96N76 676 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 CCDC115Q96NT0 180 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 ERMAPQ96PL5 475 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 F2RL3Q96RI0 385 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 MRPL9Q9BYD2 267 aaKnown RBP11.83□□□□□ -0.52
UBE3B-204ENST00000449510 DPAGT1Q9H3H5 408 aa11.83□□□□□ -0.52
UBE3B-204ENST00000449510 TEX13CA0A0J9YWL9 993 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 GIFP27352 417 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 GAB1Q13480 694 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PGBD2Q6P3X8 592 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 COMMD6Q7Z4G1 85 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 ABI3BPQ7Z7G0 1075 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 RNF180Q86T96 592 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 SLC38A6Q8IZM9 456 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 FAM98AQ8NCA5 519 aaKnown RBP11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PJA1Q8NG27 643 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 ZCCHC2Q9C0B9 1178 aaKnown RBP11.82□□□□□ -0.52
UBE3B-204ENST00000449510 OR10A4Q9H209 315 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 TMEM184CQ9NVA4 438 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PHLPP1O60346 1717 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 OR6C75A6NL08 312 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 AKAP8O43823 692 aaKnown RBP11.82□□□□□ -0.52
UBE3B-204ENST00000449510 RPP14O95059 124 aaKnown RBP11.82□□□□□ -0.52
UBE3B-204ENST00000449510 TSPAN12O95859 305 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PAHP00439 452 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 ANXA3P12429 323 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 MTNR1AP48039 350 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 GPR33Q49SQ1 333 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 CCSMST1Q4G0I0 132 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 C8orf82Q6P1X6 216 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-204ENST00000449510 XKRXQ6PP77 449 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 CCDC116Q8IYX3 515 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 OR6K6Q8NGW6 343 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 C1orf216Q8TAB5 229 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 WDR48Q8TAF3 677 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 HYLS1Q96M11 299 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 IFT27Q9BW83 186 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 TXNL4BQ9NX01 149 aaKnown RBP11.82□□□□□ -0.52
UBE3B-204ENST00000449510 TAC3Q9UHF0 121 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 TBC1D24Q9ULP9 559 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 ABHD14A-ACY1A0A1B0GW23 586 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 H7BY64 318 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PSMD9O00233 223 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 EPHX1P07099 455 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PYCR1P32322 319 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 NCBP2P52298 156 aaKnown RBP eCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms