RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 SLX4IPQ5VYV7 408 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 SLC22A16Q86VW1 577 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 ATCAYQ86WG3 371 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 LYSMD2Q8IV50 215 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 OR4D11Q8NGI4 311 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 MGLLQ99685 303 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 CHCHD6Q9BRQ6 235 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 FUZQ9BT04 418 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 DDX31Q9H8H2 851 aaKnown RBP16.06■□□□□ 0.16
TOM1-210ENST00000449058 UGT2A1Q9Y4X1 527 aa16.06■□□□□ 0.16
TOM1-210ENST00000449058 IGLON5A6NGN9 336 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 SAGE2PA6NJ88 616 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 ANHXE9PGG2 379 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 TLR4O00206 839 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 UGT2B15P54855 530 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 ZNF181Q2M3W8 571 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 TMEM201Q5SNT2 666 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 DCST1Q5T197 706 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 LINC01555Q8NAE3 123 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 C6orf62Q9GZU0 229 aaPredicted RBP16.05■□□□□ 0.16
TOM1-210ENST00000449058 SCHIP1Q9P0W5 487 aaPredicted RBP16.05■□□□□ 0.16
TOM1-210ENST00000449058 PRAMEF27A3QJZ7 478 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 LINC01553A4QN01 128 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 ANTXRLA6NF34 631 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 H1F0P07305 194 aaKnown RBP16.05■□□□□ 0.16
TOM1-210ENST00000449058 HSMCR30P0CW71 290 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 CCT3P49368 545 aaKnown RBP16.05■□□□□ 0.16
TOM1-210ENST00000449058 PRKCDQ05655 676 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 CDC20Q12834 499 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 DOC2BQ14184 412 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 TPRG1LQ5T0D9 272 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 C12orf73Q69YU5 71 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 RBM45Q8IUH3 476 aaKnown RBP16.05■□□□□ 0.16
TOM1-210ENST00000449058 RASSF5Q8WWW0 418 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 ERLEC1Q96DZ1 483 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 ASB16Q96NS5 453 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 ZNF607Q96SK3 696 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 TAPBPLQ9BX59 468 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 C11orf16Q9NQ32 467 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 POLE4Q9NR33 117 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 DPP7Q9UHL4 492 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 HCN2Q9UL51 889 aa16.05■□□□□ 0.16
TOM1-210ENST00000449058 TRPM6Q9BX84 2022 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 A0A0A6YYD5 115 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 KMOO15229 486 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 OR1F1O43749 312 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 LCMT2O60294 686 aaKnown RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 ENTPD6O75354 484 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 SLC35G4P0C7Q5 338 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 DGKEP52429 567 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 TRA2BP62995 288 aaKnown RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 CSNK1G2P78368 415 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 CD300CQ08708 224 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 SFSWAPQ12872 951 aaKnown RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 NUMA1Q14980 2115 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 KIAA1161Q6NSJ0 714 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 C12orf76Q8N812 135 aaPredicted RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 AMER3Q8N944 861 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 UCN3Q969E3 161 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 TREX2Q9BQ50 279 aaPredicted RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 WFDC6Q9BQY6 131 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 SP140LQ9H930 580 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 ZDHHC4Q9NPG8 344 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 GPC6Q9Y625 555 aaPredicted RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 C5orf67F2Z3F1 127 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 SH3BP5O60239 455 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 SLITRK5O94991 958 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 DRD3P35462 400 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 CLCNKAP51800 687 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 TAS2R38P59533 333 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 ZNF45Q02386 682 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 TP53BP2Q13625 1128 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 MED22Q15528 200 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 TSTQ16762 297 aaKnown RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 TMEM240Q5SV17 173 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 PGBD2Q6P3X8 592 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 TP53I13Q8NBR0 393 aaPredicted RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 CREB3L4Q8TEY5 395 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 Q96MT0 163 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 TEFMQ96QE5 360 aaKnown RBP16.04■□□□□ 0.16
TOM1-210ENST00000449058 IL4I1Q96RQ9 567 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 TEX101Q9BY14 249 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 RWDD3Q9Y3V2 267 aa16.04■□□□□ 0.16
TOM1-210ENST00000449058 CHD7Q9P2D1 2997 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 C2orf16Q68DN1 1984 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 CCRL2O00421 344 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 ARHGAP33O14559 1287 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 SLC28A2O43868 658 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 CLEC3AO75596 197 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 EPHX1P07099 455 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 IGFBP1P08833 259 aaPredicted RBP16.03■□□□□ 0.16
TOM1-210ENST00000449058 SMIM11AP58511 58 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 SSX1Q16384 188 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 SYPL1Q16563 259 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 TIMM50Q3ZCQ8 353 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 FAM46CQ5VWP2 391 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 OR4C11Q6IEV9 310 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 DEF8Q6ZN54 512 aa16.03■□□□□ 0.16
TOM1-210ENST00000449058 WDR36Q8NI36 951 aaKnown RBP16.03■□□□□ 0.16
TOM1-210ENST00000449058 VANGL1Q8TAA9 524 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms