RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 CLDN16Q9Y5I7 305 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 SCN2AQ99250 2005 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 HELZ2Q9BYK8 2649 aaKnown RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 DYTNA2CJ06 578 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ERAL1O75616 437 aaKnown RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 IL3P08700 152 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 PRPH2P23942 346 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ARRB2P32121 409 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 RPL14P50914 215 aaKnown RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 RAE1P78406 368 aaKnown RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ARG2P78540 354 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 BST1Q10588 318 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ATP6AP1LQ52LC2 224 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 C6orf163Q5TEZ5 329 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 B3GNTL1Q67FW5 361 aaPredicted RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 NOXRED1Q6NXP6 359 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 SLC48A1Q6P1K1 146 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ZNF781Q8N8C0 355 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 NFAM1Q8NET5 270 aaPredicted RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 RAB3IL1Q8TBN0 382 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ELP5Q8TE02 316 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 C16orf78Q8WTQ4 265 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 PTPMT1Q8WUK0 201 aaPredicted RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 PSMF1Q92530 271 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 UCN3Q969E3 161 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 NCLNQ969V3 563 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 PPWD1Q96BP3 646 aaKnown RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 KLHL29Q96CT2 875 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ART5Q96L15 291 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 PPP3R2Q96LZ3 170 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 MFRPQ9BY79 579 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 DEFB126Q9BYW3 111 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 OR8D2Q9GZM6 311 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ZNF395Q9H8N7 513 aaPredicted RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 STMN3Q9NZ72 180 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 COPS7AQ9UBW8 275 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ANAPC2Q9UJX6 822 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 WBP11Q9Y2W2 641 aaKnown RBP13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 TMED5Q9Y3A6 229 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 CCL27Q9Y4X3 112 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 ZNF780BQ9Y6R6 833 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 BOD1L1Q8NFC6 3051 aa13.09□□□□□ -0.31
GTF3C3-206ENST00000448539 BSNQ9UPA5 3926 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 TRBV11-1A0A0K0K1C0 115 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 WASHC1A8K0Z3 465 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 NPIPB8E9PQR5 432 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 SLC35E2P0CK97 266 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 MAPK1P28482 360 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 SOX11P35716 441 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 XKP51811 444 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 RPL38P63173 70 aaKnown RBP13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 MEP1AQ16819 746 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 GALNTL6Q49A17 601 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 CES4AQ5XG92 561 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 FCRLBQ6BAA4 426 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 IGFL3Q6UXB1 125 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 ATG14Q6ZNE5 492 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 Q6ZSR9 355 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 KIF2BQ8N4N8 673 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 AMER2Q8N7J2 671 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 OR2T11Q8NH01 316 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 SLC2A12Q8TD20 617 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 DYDC1Q8WWB3 177 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 RIT1Q92963 219 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 C11orf24Q96F05 449 aaPredicted RBP13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 MANSC1Q9H8J5 431 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 MIEF1Q9NQG6 463 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 GIMAP4Q9NUV9 329 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 THAP1Q9NVV9 213 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 UTS2RQ9UKP6 389 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF462Q96JM2 2506 aa13.08□□□□□ -0.32
GTF3C3-206ENST00000448539 B8ZZF3 427 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 LSM1O15116 133 aaKnown RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 PEX11AO75192 247 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 SASH3O75995 380 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 ZFAND5O76080 213 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 CPMP14384 443 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 PORP16435 677 aaPredicted RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 CSNK2A2P19784 350 aaPredicted RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 NT5EP21589 574 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 GALNSP34059 522 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 PPP2R2AP63151 447 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 C2orf80Q0P641 193 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 KIAA0040Q15053 153 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 PDCD2Q16342 344 aaPredicted RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 ACER2Q5QJU3 275 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 H3F3CQ6NXT2 135 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 IGFL2Q6UWQ7 119 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 HSDL2Q6YN16 418 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 IKBIPQ70UQ0 350 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 RPS19BP1Q86WX3 136 aaKnown RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 SAMD14Q8IZD0 417 aaPredicted RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 MMP21Q8N119 569 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 LGI4Q8N135 537 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 RBMXL3Q8N7X1 1067 aaKnown RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 APCDD1LQ8NCL9 501 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 OR1N1Q8NGS0 311 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 EXOSC8Q96B26 276 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms